Lineage for d6ygya_ (6ygy A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2448538Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2448539Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
  6. 2448550Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2448579Species Zymomonas mobilis [TaxId:542] [51716] (156 PDB entries)
    Uniprot P28720
  8. 2448681Domain d6ygya_: 6ygy A: [383520]
    automated match to d5lpta_
    protein/RNA complex; complexed with nez, zn

Details for d6ygya_

PDB Entry: 6ygy (more details), 1.52 Å

PDB Description: trna-guanine transglycosylase (tgt) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-4-[2-(4-methylphenyl)ethyl]-1,7- dihydro-8h-imidazo[4,5-g]quinazolin-8-one
PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d6ygya_:

Sequence, based on SEQRES records: (download)

>d6ygya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfa

Sequence, based on observed residues (ATOM records): (download)

>d6ygya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtagadiilgntyhlmlrpgaeri
aklgglhsfmgwdrpiltdsggyqvmslsltkqseegvtfkgsrhmlspersieiqhllg
sdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvfe
nlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpddi
vgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsr
ayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryfa

SCOPe Domain Coordinates for d6ygya_:

Click to download the PDB-style file with coordinates for d6ygya_.
(The format of our PDB-style files is described here.)

Timeline for d6ygya_: