SCOPe 2.07: Domain d6y2gb_: 6y2g B:

Lineage for d6y2gb_ (6y2g B:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 proteins)

6. Protein automated matches [190384] (21 species)
   not a true protein

7. Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382084] (300 PDB entries)

8. Domain d6y2gb_: 6y2g B: [383502]
   automated match to d3ea8a_
   complexed with gly, o6k

Details for d6y2gb_

PDB Entry: 6y2g, 2.2 Å

PDB Description: crystal structure (orthorhombic form) of the complex resulting from the reaction between sars-cov-2 (2019-ncov) main protease and tert- butyl (1-((s)-1-(((s)-4-(benzylamino)-3,4-dioxo-1-((s)-2- oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)- 2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)

PDB Compounds: (B:) SARS-CoV-2 (2019-nCoV) main protease

SCOPe Domain Sequences for d6y2gb_:

Sequence; same for both SEQRES and ATOM records:

>d6y2gb_ b.47.1.4 (B:) automated matches {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
sgfrkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedllir
ksnhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyng
spsgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegn
fygpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkynye
pltqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrqc
sgv

Timeline for d6y2gb_:

• d6y2gb_ is new in SCOPe 2.07-stable
  
• d6y2gb_ appears in the current release, SCOPe 2.08