Lineage for d6jcsa_ (6jcs A:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2430785Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2431981Superfamily b.121.5: ssDNA viruses [88645] (4 families) (S)
  5. 2432000Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 2432026Protein automated matches [190920] (12 species)
    not a true protein
  7. 2432042Species Adeno-associated virus - 5 [TaxId:82300] [372302] (2 PDB entries)
  8. 2432043Domain d6jcsa_: 6jcs A: [372988]
    automated match to d3oaha_

Details for d6jcsa_

PDB Entry: 6jcs (more details), 3.18 Å

PDB Description: aav5 in complex with aavr
PDB Compounds: (A:) capsid protein

SCOPe Domain Sequences for d6jcsa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6jcsa_ b.121.5.2 (A:) automated matches {Adeno-associated virus - 5 [TaxId: 82300]}
dgvgnasgdwhcdstwmgdrvvtkstrtwvlpsynnhqyreiksgsvdgsnanayfgyst
pwgyfdfnrfhshwsprdwqrlinnywgfrprslrvkifniqvkevtvqdstttiannlt
stvqvftdddyqlpyvvgngtegclpafppqvftlpqygyatlnrdntenpterssffcl
eyfpskmlrtgnnfeftynfeevpfhssfapsqnlfklanplvdqylyrfvstnntggvq
fnknlagryantyknwfpgpmgrtqgwnlgsgvnrasvsafattnrmelegasyqvppqp
ngmtnnlqgsntyalentmifnsqpanpgttatylegnmlitsesetqpvnrvaynvggq
matnnqssttapatgtynlqeivpgsvwmerdvylqgpiwakipetgahfhpspamggfg
lkhpppmmlikntpvpgnitsfsdvpvssfitqystgqvtvemewelkkenskrwnpeiq
ytnnyndpqfvdfapdstgeyrttrpigtryltrpl

SCOPe Domain Coordinates for d6jcsa_:

Click to download the PDB-style file with coordinates for d6jcsa_.
(The format of our PDB-style files is described here.)

Timeline for d6jcsa_: