Lineage for d6c6fa2 (6c6f A:186-279)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2355236Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2355237Protein automated matches [190740] (25 species)
    not a true protein
  7. 2357727Species Mouse (Mus musculus) [TaxId:10090] [188198] (670 PDB entries)
  8. 3063096Domain d6c6fa2: 6c6f A:186-279 [363158]
    Other proteins in same PDB: d6c6fa1, d6c6fb_
    automated match to d1zt4c1
    complexed with bma, els, fuc, man, na, nag

Details for d6c6fa2

PDB Entry: 6c6f (more details), 1.67 Å

PDB Description: structure of glycolipid agsa[26,p5p] in complex with mouse cd1d
PDB Compounds: (A:) Antigen-presenting glycoprotein CD1d1

SCOPe Domain Sequences for d6c6fa2:

Sequence, based on SEQRES records: (download)

>d6c6fa2 b.1.1.0 (A:186-279) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qekpvawlssvpssahghrqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetw
ylqatldveageeaglacrvkhsslggqdiilyw

Sequence, based on observed residues (ATOM records): (download)

>d6c6fa2 b.1.1.0 (A:186-279) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qekpvawlssvhrqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetwylqatl
dveageeaglacrvkhsslggqdiilyw

SCOPe Domain Coordinates for d6c6fa2:

Click to download the PDB-style file with coordinates for d6c6fa2.
(The format of our PDB-style files is described here.)

Timeline for d6c6fa2:

  • d6c6fa2 appears in periodic updates to SCOPe 2.07 starting on 2019-02-05

View in 3D
Domains from same chain:
(mouse over for more information)
d6c6fa1
View in 3D
Domains from other chains:
(mouse over for more information)
d6c6fb_