Lineage for d6c69a1 (6c69 A:7-185)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2506503Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2506504Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2507530Family d.19.1.0: automated matches [227140] (1 protein)
    not a true family
  6. 2507531Protein automated matches [226842] (4 species)
    not a true protein
  7. 2507687Species Mouse (Mus musculus) [TaxId:10090] [224924] (65 PDB entries)
  8. 3063018Domain d6c69a1: 6c69 A:7-185 [363080]
    Other proteins in same PDB: d6c69a2, d6c69b_
    automated match to d1zt4c2
    complexed with elm, fuc, nag, plm

Details for d6c69a1

PDB Entry: 6c69 (more details), 1.94 Å

PDB Description: structure of glycolipid agsa[12,6p] in complex with mouse cd1d
PDB Compounds: (A:) Antigen-presenting glycoprotein CD1d1

SCOPe Domain Sequences for d6c69a1:

Sequence, based on SEQRES records: (download)

>d6c69a1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyvv
rfwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d6c69a1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmdypieiqlsagcemypgnasesflhvafqgkyvvrfwg
tswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d6c69a1:

Click to download the PDB-style file with coordinates for d6c69a1.
(The format of our PDB-style files is described here.)

Timeline for d6c69a1:

  • d6c69a1 appears in periodic updates to SCOPe 2.07 starting on 2019-02-05

View in 3D
Domains from same chain:
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d6c69a2
View in 3D
Domains from other chains:
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d6c69b_