Class b: All beta proteins [48724] (178 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold |
Family b.82.2.14: Histone demethylase core [254153] (4 proteins) Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801 |
Protein JMJD2D core [254343] (1 species) |
Species Human (Homo sapiens) [TaxId:9606] [254776] (22 PDB entries) |
Domain d6f5ta_: 6f5t A: [361091] automated match to d3dxua_ complexed with cqk, edo, epe, ni, so4, zn |
PDB Entry: 6f5t (more details), 1.58 Å
SCOPe Domain Sequences for d6f5ta_:
Sequence; same for both SEQRES and ATOM records: (download)
>d6f5ta_ b.82.2.14 (A:) JMJD2D core {Human (Homo sapiens) [TaxId: 9606]} aqnpncnimifhptkeefndfdkyiaymesqgahraglakiippkewkaretydniseil iatplqqvasgragvftqyhkkkkamtvgeyrhlanskkyqtpphqnfedlerkywknri ynspiygadisgslfdentkqwnlghlgtiqdllekecgvviegvntpylyfgmwkttfa whtedmdlysinylhlgepktwyvvppehgqrlerlarelfpgssrgcgaflrhkvalis ptvlkengipfnritqeagefmvtfpygyhagfnhgfncaeainfatprwidygkmasqc scgearvtfsmdafvrilqperydlwkrgq
Timeline for d6f5ta_: