SCOP 1.55: Domain d1pda_1: 1pda 3-219

Lineage for d1pda_1 (1pda 3-219)

1. Root: SCOP 1.55

2. Class c: Alpha and beta proteins (a/b) [51349] (97 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families)

5. Family c.94.1.1: Phosphate binding protein-like [53851] (16 proteins)

6. Protein Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain [53854] (1 species)

7. Species Escherichia coli [TaxId:562] [53855] (4 PDB entries)

8. Domain d1pda_1: 1pda 3-219 [35751]
   Other proteins in same PDB: d1pda_2

Details for d1pda_1

PDB Entry: 1pda, 1.76 Å

PDB Description: structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site

SCOP Domain Sequences for d1pda_1:

Sequence, based on SEQRES records:

>d1pda_1 c.94.1.1 (3-219) Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain {Escherichia coli}
dnvlriatrqsplalwqahyvkdklmashpglvvelvpmvtrgdvildtplakvggkglf
vkelevallenradiavhsmkdvpvefpqglglvticeredprdafvsnnydsldalpag
sivgtsslrrqcqlaerrpdliirslrgnvgtrlskldngeydaiilavaglkrlglesr
iraalppeislpavgqgavgiecrlddsrtrellaal

Sequence, based on observed residues (ATOM records):

>d1pda_1 c.94.1.1 (3-219) Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain {Escherichia coli}
dnvlriatrqsplalwqahyvkdklmashpglvvelvpmvtrgdvigkglfvkelevall
enradiavhsmkdvpvefpqglglvticeredprdafvsnnydsldalpagsivgtsslr
rqcqlaerrpdliirslrgnvgtrlskldngeydaiilavaglkrlglesriraalppei
slpavgqgavgiecrlddsrtrellaal

Timeline for d1pda_1:

• d1pda_1 appears in SCOP 1.57
  
• d1pda_1 appears in the current release, SCOPe 2.08, called d1pdaa1