SCOPe 2.07: Domain d5y4ns_: 5y4n S:

Lineage for d5y4ns_ (5y4n S:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.19: HydA/Nqo6-like [56769] (1 superfamily)
   2 domains: (1) alpa/beta; (2) Fe-S cluster-bound

4. Superfamily e.19.1: HydA/Nqo6-like [56770] (3 families)

5. Family e.19.1.1: Nickel-iron hydrogenase, small subunit [56771] (2 proteins)

6. Protein Nickel-iron hydrogenase, small subunit [56772] (5 species)

7. Species Desulfovibrio vulgaris [TaxId:881] [56774] (16 PDB entries)

8. Domain d5y4ns_: 5y4n S: [355900]
   Other proteins in same PDB: d5y4nl_
   automated match to d1ubks_
   complexed with f3s, mg, mpd, mrd, nfu, sf4, trs

Details for d5y4ns_

PDB Entry: 5y4n, 1.69 Å

PDB Description: crystal structure of aerobically purified and anaerobically crystallized d. vulgaris miyazaki f [nife]-hydrogenase

PDB Compounds: (S:) Periplasmic [NiFe] hydrogenase Small subunit

SCOPe Domain Sequences for d5y4ns_:

Sequence; same for both SEQRES and ATOM records:

>d5y4ns_ e.19.1.1 (S:) Nickel-iron hydrogenase, small subunit {Desulfovibrio vulgaris [TaxId: 881]}
prrpsvvylhnaectgcsesvlrafepyidtlildtlsldyhetimaaagdaaeaaleqa
vnsphgfiavveggiptaangiygkvanhtmldicsrilpkaqaviaygtcatfggvqaa
kpnptgakgvndalkhlgvkainiagcppnpynlvgtivyylknkaapeldslnrptmff
gqtvheqcprlphfdagefapsfeseearkgwclyelgckgpvtmnncpkikfnqtnwpv
daghpcigcsepdfwdamtpfyqn

Timeline for d5y4ns_:

• d5y4ns_ is new in SCOPe 2.07-stable
  
• d5y4ns_ appears in the current release, SCOPe 2.08