SCOPe 2.07: Domain d5xpoa_: 5xpo A:

Lineage for d5xpoa_ (5xpo A:)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Vitamin D nuclear receptor [48528] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [101432] (25 PDB entries)

8. Domain d5xpoa_: 5xpo A: [353332]
   automated match to d1ie9a_
   complexed with 8bl

Details for d5xpoa_

PDB Entry: 5xpo, 2.28 Å

PDB Description: crystal structure of vdr-lbd complexed with 25-(hydroxyphenyl)-2- methylidene-19,26,27-trinor-25-oxo-1-hydroxyvitamin d3

PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d5xpoa_:

Sequence, based on SEQRES records:

>d5xpoa_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphladl
vsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdy
kydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklve
aiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmk
ltplvlevfg

Sequence, based on observed residues (ATOM records):

>d5xpoa_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmsplsmlphladlvsysiqkvigf
akmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskag
htlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlq
tyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfg

Timeline for d5xpoa_:

• d5xpoa_ is new in SCOPe 2.07-stable
  
• d5xpoa_ appears in the current release, SCOPe 2.08