Lineage for d5y6dd_ (5y6d D:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2602905Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
    duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
  4. 2602906Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (15 families) (S)
  5. 2602907Family d.157.1.1: Zn metallo-beta-lactamase [56282] (2 proteins)
  6. 2603069Protein automated matches [190079] (12 species)
    not a true protein
  7. 2603137Species Pseudomonas aeruginosa [TaxId:287] [189349] (72 PDB entries)
  8. 2603244Domain d5y6dd_: 5y6d D: [348765]
    automated match to d5lsca_
    complexed with 8pl, fmt, zn

Details for d5y6dd_

PDB Entry: 5y6d (more details), 2.1 Å

PDB Description: vim-2 metallo-beta-lactamase in complex with (r)-2-(4-fluorophenyl)-2- ((s)-3-mercapto-2-methylpropanamido)acetic acid (compound 11)
PDB Compounds: (D:) beta-lactamase class b vim-2

SCOPe Domain Sequences for d5y6dd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5y6dd_ d.157.1.1 (D:) automated matches {Pseudomonas aeruginosa [TaxId: 287]}
eyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllidtawgakn
taallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlaevegneip
thsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyelsrtsagnv
adadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtn

SCOPe Domain Coordinates for d5y6dd_:

Click to download the PDB-style file with coordinates for d5y6dd_.
(The format of our PDB-style files is described here.)

Timeline for d5y6dd_: