Lineage for d5n48a_ (5n48 A:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2413759Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2413760Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 2413761Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander
  6. 2413962Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  7. 2413963Species Human (Homo sapiens) [TaxId:9606] [50836] (50 PDB entries)
  8. 2413966Domain d5n48a_: 5n48 A: [346740]
    Other proteins in same PDB: d5n48b_, d5n48d1, d5n48d2
    automated match to d1ngla_

Details for d5n48a_

PDB Entry: 5n48 (more details), 1.6 Å

PDB Description: structure of anticalin n9b in complex with extra-domain b of human oncofetal fibronectin
PDB Compounds: (A:) Neutrophil gelatinase-associated lipocalin

SCOPe Domain Sequences for d5n48a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5n48a_ b.60.1.1 (A:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
stsdlipapplskvplqqnfqdnqfhgkwyvvgragnmrlredkdpakmvatiyelkedk
synvtkvmfqrkkckymintfvpgsqpgeftlgaiksppgptstlvrvvstnynqhamvf
fkhvfqnreyfhitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

SCOPe Domain Coordinates for d5n48a_:

Click to download the PDB-style file with coordinates for d5n48a_.
(The format of our PDB-style files is described here.)

Timeline for d5n48a_: