SCOP 1.71: Domain d1ordb2: 1ord B:108-569

Lineage for d1ordb2 (1ord B:108-569)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.67: PLP-dependent transferases [53382] (1 superfamily)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (6 families)

5. Family c.67.1.5: Ornithine decarboxylase major domain [53444] (1 protein)

6. Protein Ornithine decarboxylase major domain [53445] (1 species)

7. Species Lactobacillus sp., strain 30a [TaxId:1591] [53446] (2 PDB entries)

8. Domain d1ordb2: 1ord B:108-569 [34504]
   Other proteins in same PDB: d1orda1, d1orda3, d1ordb1, d1ordb3
   complexed with plp

Details for d1ordb2

PDB Entry: 1ord, 3 Å

PDB Description: crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution

SCOP Domain Sequences for d1ordb2:

Sequence; same for both SEQRES and ATOM records:

>d1ordb2 c.67.1.5 (B:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a}
ppffkslkeyvsrgliqfdcpghqggqyyrkhpagrefydffgetvfradlcnadvalgd
llihegpavaaekhaarvynadktyfvlggssnanntvtsalvsngdlvlfdrnnhksvy
nsalamaggrpvylqtnrnpygfiggiydsdfdekkirelaakvdperakwkrpfrlavi
qlgtydgtiynahevvkrighlcdyiefdsawvgyeqfipmmrnssplliddlgpedpgi
ivvqsvhkqqagfsqtsqihkkdshikgqlrycdhkhfnnsfnlfmstspfypmyaaldv
naamqegeagrklwhdllittiearkklikagsmfrpfvppvvngkkwedgdtedmanni
dywrfekgakwhayegygdnqyyvdpnkfmlttpginpetgdyedfgvpativanylrdh
giipeksdlnsilflmtpaetpakmnnlitqllqlqrlieed

Timeline for d1ordb2:

• d1ordb2 first appeared (with stable ids) in SCOP 1.55
  
• d1ordb2 appears in SCOP 1.69
  
• d1ordb2 appears in SCOP 1.73
  
• d1ordb2 appears in the current release, SCOPe 2.08