Lineage for d3jb9r_ (3jb9 R:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2725421Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2726649Superfamily a.118.8: TPR-like [48452] (11 families) (S)
  5. 2726917Family a.118.8.7: HAT/Suf repeat [158782] (4 proteins)
    includes Pfam PF05843
    Pfam PF02184

    this is a repeat family; one repeat unit is 2ond A:372-408 found in domain
  6. Protein Pre-mRNA splicing factor Cwf4 / Syf3 [346030] (1 species)
  7. Species Schizosaccharomyces pombe 972h- [TaxId:284812] [346192] (1 PDB entry)
  8. 2726931Domain d3jb9r_: 3jb9 R: [344812]
    Other proteins in same PDB: d3jb9a1, d3jb9a2, d3jb9a3, d3jb9a4, d3jb9a5, d3jb9b1, d3jb9b2, d3jb9b3, d3jb9b4, d3jb9b5, d3jb9c_, d3jb9e_, d3jb9f_, d3jb9g_, d3jb9h_, d3jb9i_, d3jb9j_, d3jb9k_, d3jb9l_, d3jb9m_, d3jb9s1, d3jb9s2, d3jb9t1, d3jb9t2, d3jb9u1, d3jb9u2, d3jb9u3, d3jb9v1, d3jb9v2, d3jb9w_, d3jb9x1, d3jb9x2, d3jb9x3, d3jb9x4, d3jb9y1, d3jb9y2, d3jb9z_
    protein/RNA complex; complexed with adp, gdp, mg, zn
    applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d3jb9r_

PDB Entry: 3jb9 (more details), 3.6 Å

PDB Description: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
PDB Compounds: (R:) Pre-mRNA-splicing factor cwf4

SCOPe Domain Sequences for d3jb9r_:

Sequence, based on SEQRES records: (download)

>d3jb9r_ a.118.8.7 (R:) Pre-mRNA splicing factor Cwf4 / Syf3 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}
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wmrygqweldqkefararsvferaldvdstyiplwlkyiecemknrninharnlfdravt
qlprvdklwykyvymeemlgnitgcrqvferwlkwepdencwmsyirmerryhenerarg
iyerfvvvhpevtnwlrwarfeeecgnaanvrqvylaaidalgqeflnerffiafakfei
rqkeyerartifkyaidfmprsksmelykeythfekqfxxxxxxxxxxxxxxxxxxxxxx
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Sequence, based on observed residues (ATOM records): (download)

>d3jb9r_ a.118.8.7 (R:) Pre-mRNA splicing factor Cwf4 / Syf3 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}
xxxxxxxxxxxxxxxxnitdleelqefqgrkrkefedairrnrlamghwmrygqweldqk
efararsvferaldvdstyiplwlkyiecemknrninharnlfdravtqlprvdklwyky
vymeemlgnitgcrqvferwlkwepdencwmsyirmerryhenerargiyerfvvvhpev
tnwlrwarfeeecgnaanvrqvylaaidalgqeflnerffiafakfeirqkeyerartif
kyaidfmprsksmelykeythfekqfxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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SCOPe Domain Coordinates for d3jb9r_:

Click to download the PDB-style file with coordinates for d3jb9r_.
(The format of our PDB-style files is described here.)

Timeline for d3jb9r_: