SCOPe 2.08: Domain d3jb9m_: 3jb9 M:

Lineage for d3jb9m_ (3jb9 M:)

1. Root: SCOPe 2.08

2. Class j: Peptides [58231] (151 folds)

3. Fold j.137: Pre-mRNA splicing factor Prp45-like [345901] (1 superfamily)
   Extended, mostly disordered

4. Superfamily j.137.1: Pre-mRNA splicing factor Prp45-like [345937] (1 family)
   Pfam PF02731

5. Family j.137.1.1: Pre-mRNA splicing factor Prp45-like [345995] (1 protein)

6. Protein Pre-mRNA splicing factor Prp45 [346138] (1 species)

7. Species Schizosaccharomyces pombe 972h- [TaxId:284812] [346454] (1 PDB entry)

8. Domain d3jb9m_: 3jb9 M: [344811]
   Other proteins in same PDB: d3jb9a1, d3jb9a2, d3jb9a3, d3jb9a4, d3jb9a5, d3jb9b1, d3jb9b2, d3jb9b3, d3jb9b4, d3jb9b5, d3jb9c_, d3jb9e_, d3jb9f_, d3jb9g_, d3jb9h_, d3jb9i_, d3jb9j_, d3jb9k_, d3jb9l_, d3jb9r_, d3jb9s1, d3jb9s2, d3jb9t1, d3jb9t2, d3jb9u1, d3jb9u2, d3jb9u3, d3jb9v1, d3jb9v2, d3jb9w_, d3jb9x1, d3jb9x2, d3jb9x3, d3jb9x4, d3jb9y1, d3jb9y2, d3jb9z_
   protein/RNA complex; complexed with adp, gdp, mg, zn

Details for d3jb9m_

PDB Entry: 3jb9, 3.6 Å

PDB Description: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution

PDB Compounds: (M:) Pre-mRNA-processing protein 45

SCOPe Domain Sequences for d3jb9m_:

Sequence, based on SEQRES records:

>d3jb9m_ j.137.1.1 (M:) Pre-mRNA splicing factor Prp45 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}
avdynaiarqghehgelvqasfrdliplrarlgvgeislekpsdeqkqevanktklalqk
ilskqiaqsqpksavvqqrddpvyirytpsnqmgqalskqriikmvtaeqdpmeppkfrh
kkvprgppsppppvlhspprkvsaqeqqdwqippsisnwknpkgytipldkrlaadgrgl
ndveindgfakfsealytverqareevryraimrqk

Sequence, based on observed residues (ATOM records):

>d3jb9m_ j.137.1.1 (M:) Pre-mRNA splicing factor Prp45 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}
avdynaiarqghehgelvqasfrdliplrarlgvgeislekpsdeqkqevanktklalqk
ilskqiaqsqpksavvqqrddpvyirytpsnqmgqalskqriikmvtaeqdpmeppkfrh
kkvprgppsppppvlhspprkvsaqeqqdwqippsisnwknpkgytipldkrdveindgf
akfsealytverqareevryraimrqk

Timeline for d3jb9m_:

• d3jb9m_ first appeared in SCOPe 2.07