Lineage for d5ongh_ (5ong H:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311419Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2311420Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2311421Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
    form octamers composed of two copies of each of the four histones
  6. 2311535Protein Histone H2B [47119] (6 species)
  7. 2311536Species African clawed frog (Xenopus laevis) [TaxId:8355] [47121] (42 PDB entries)
  8. 2311609Domain d5ongh_: 5ong H: [341834]
    Other proteins in same PDB: d5ongb_, d5ongc_, d5ongf_, d5ongg_
    automated match to d1s32d_
    complexed with cl, mn

Details for d5ongh_

PDB Entry: 5ong (more details), 2.8 Å

PDB Description: x-ray crystal structure of a nucleosome core particle with its dna site-specifically crosslinked to the histone octamer
PDB Compounds: (H:) Histone H2B 1.1

SCOPe Domain Sequences for d5ongh_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ongh_ a.22.1.1 (H:) Histone H2B {African clawed frog (Xenopus laevis) [TaxId: 8355]}
trkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstits
reiqtavrlllpgelakhavsegtkavtkytsa

SCOPe Domain Coordinates for d5ongh_:

Click to download the PDB-style file with coordinates for d5ongh_.
(The format of our PDB-style files is described here.)

Timeline for d5ongh_: