Lineage for d5thpd_ (5thp D:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2208774Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 2208775Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 2208776Family d.169.1.1: C-type lectin domain [56437] (29 protein domains)
    Pfam PF00059
  6. 2209209Protein automated matches [190329] (9 species)
    not a true protein
  7. 2209253Species Malayan pit viper (Calloselasma rhodostoma) [TaxId:8717] [188489] (3 PDB entries)
  8. 2293955Domain d5thpd_: 5thp D: [337256]
    Other proteins in same PDB: d5thpc_, d5thpf_, d5thpi_, d5thpl_, d5thpo_, d5thpr_
    automated match to d1v4la_
    complexed with cl, gol, mg, na, so4

Details for d5thpd_

PDB Entry: 5thp (more details), 3.01 Å

PDB Description: rhodocetin in complex with the integrin alpha2-a domain
PDB Compounds: (D:) Snaclec rhodocetin subunit gamma

SCOPe Domain Sequences for d5thpd_:

Sequence, based on SEQRES records: (download)

>d5thpd_ d.169.1.1 (D:) automated matches {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
fnclpgwsaydqhcyqafnepktwdeaerfcteqakrghlvsigsdgeadfvaqlvtnni
krpelyvwiglrdrrkeqqcssewsmsasiiyvnwntgesqmcqglarwtgfrkwdysdc
qaknpfvckfps

Sequence, based on observed residues (ATOM records): (download)

>d5thpd_ d.169.1.1 (D:) automated matches {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
fnclpgwsaydqhcyqafnepktwdeaerfcteqaghlvsigsdgeadfvaqlvtnnikr
pelyvwiglrdrrkeqqcssewsmsasiiyvnwntgesqmcqglarwtgfrkwdysdcqa
knpfvckfps

SCOPe Domain Coordinates for d5thpd_:

Click to download the PDB-style file with coordinates for d5thpd_.
(The format of our PDB-style files is described here.)

Timeline for d5thpd_:

  • d5thpd_ appears in periodic updates to SCOPe 2.06 starting on 2017-08-03