SCOP 1.57: Domain d1b9da_: 1b9d A:

Lineage for d1b9da_ (1b9d A:)

1. Root: SCOP 1.57

2. Class c: Alpha and beta proteins (a/b) [51349] (107 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)

4. Superfamily c.55.3: Ribonuclease H-like [53098] (6 families)

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (1 protein)

6. Protein Retroviral integrase, catalytic domain [53108] (3 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (16 PDB entries)

8. Domain d1b9da_: 1b9d A: [33649]

Details for d1b9da_

PDB Entry: 1b9d, 1.7 Å

PDB Description: mobility of an hiv-1 integrase active site loop is correlated with catalytic activity

SCOP Domain Sequences for d1b9da_:

Sequence, based on SEQRES records:

>d1b9da_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqefgipynpqsqgviesmnkelkkiigqvrdqaehlktav
qmavfihnkkrkggiggysagerivdiiatdiqt

Sequence, based on observed residues (ATOM records):

>d1b9da_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqefggviesmnkelkkiigqvrdqaehlktavqmavfihn
kkrkggysagerivdiiatdiqt

Timeline for d1b9da_:

• d1b9da_ first appeared (with stable ids) in SCOP 1.55
  
• d1b9da_ appears in SCOP 1.59
  
• d1b9da_ appears in the current release, SCOPe 2.08