SCOP 1.67: Domain d1hvud1: 1hvu D:430-554

Lineage for d1hvud1 (1hvu D:430-554)

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (9 families)
   consists of one domain of this fold

5. Family c.55.3.1: Ribonuclease H [53099] (3 proteins)

6. Protein HIV RNase H (Domain of reverse transcriptase) [53105] (2 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (73 PDB entries)

8. Domain d1hvud1: 1hvu D:430-554 [33601]
   Other proteins in same PDB: d1hvua2, d1hvub_, d1hvud2, d1hvue_, d1hvug2, d1hvuh_, d1hvuj2, d1hvuk_

Details for d1hvud1

PDB Entry: 1hvu, 4.75 Å

PDB Description: human immunodeficiency virus type 1 reverse transcriptase complexed with a 33-base nucleotide rna pseudoknot

SCOP Domain Sequences for d1hvud1:

Sequence; same for both SEQRES and ATOM records:

>d1hvud1 c.55.3.1 (D:430-554) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1}
ekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvd
klvsa

Timeline for d1hvud1:

• d1hvud1 first appeared (with stable ids) in SCOP 1.55
  
• d1hvud1 appears in SCOP 1.65
  
• d1hvud1 appears in SCOP 1.69
  
• d1hvud1 appears in the current release, SCOPe 2.08