Lineage for d5ws5a_ (5ws5 a:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2227758Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. 2227759Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
    automatically mapped to Pfam PF00124
  5. 2227760Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 protein domains)
    L and M are probably related to each other
  6. 2227944Protein automated matches [190224] (8 species)
    not a true protein
  7. 2228038Species Thermosynechococcus vulcanus [TaxId:32053] [189911] (10 PDB entries)
  8. 2288280Domain d5ws5a_: 5ws5 a: [331581]
    Other proteins in same PDB: d5ws5b_, d5ws5c_, d5ws5e_, d5ws5f_, d5ws5h_, d5ws5j_, d5ws5k_, d5ws5o_, d5ws5v_, d5ws5x_, d5ws5z_
    automated match to d2axta1
    complexed with bcr, bct, ca, cl, cla, dgd, fe2, gol, hem, htg, lhg, lmg, lmt, mg, oex, pho, pl9, sqd, unl

Details for d5ws5a_

PDB Entry: 5ws5 (more details), 2.35 Å

PDB Description: native xfel structure of photosystem ii (preflash dark dataset)
PDB Compounds: (a:) Photosystem II D1 protein

SCOPe Domain Sequences for d5ws5a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ws5a_ f.26.1.1 (a:) automated matches {Thermosynechococcus vulcanus [TaxId: 32053]}
anlwerfcnwvtstdnrlyvgwfgvimiptllaaticfviafiaappvdidgirepvsgs
llygnniitgavvpssnaiglhfypiweaasldewlynggpyqliifhfllgascymgrq
welsyrlgmrpwicvaysaplasafavfliypigqgsfsdgmplgisgtfnfmivfqaeh
nilmhpfhqlgvagvfggalfcamhgslvtsslirettetesanygykfgqeeetyniva
ahgyfgrlifqyasfnnsrslhfflaawpvvgvwfaalgistmafnlngfnfnhsvidak
gnvintwadiinranlgmevmhernahnfpldla

SCOPe Domain Coordinates for d5ws5a_:

Click to download the PDB-style file with coordinates for d5ws5a_.
(The format of our PDB-style files is described here.)

Timeline for d5ws5a_:

  • d5ws5a_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-17