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Lineage for d5b5ea_ (5b5e a:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2227758Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. 2227759Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
    automatically mapped to Pfam PF00124
  5. 2227760Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 protein domains)
    L and M are probably related to each other
  6. 2227944Protein automated matches [190224] (8 species)
    not a true protein
  7. 2228038Species Thermosynechococcus vulcanus [TaxId:32053] [189911] (7 PDB entries)
  8. 2286086Domain d5b5ea_: 5b5e a: [329387]
    Other proteins in same PDB: d5b5ef_, d5b5eh_, d5b5ei_, d5b5ej_, d5b5el_, d5b5ev_, d5b5ex_, d5b5ez_
    automated match to d2axta1
    complexed with bcr, bct, ca, cl, cla, dgd, dms, fe2, hem, htg, lhg, lmg, lmt, mg, oex, pho, pl9, rrx, sqd, unl

Details for d5b5ea_

PDB Entry: 5b5e (more details), 1.87 Å

PDB Description: crystal structure analysis of photosystem ii complex
PDB Compounds: (a:) Photosystem II protein D1

SCOPe Domain Sequences for d5b5ea_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b5ea_ f.26.1.1 (a:) automated matches {Thermosynechococcus vulcanus [TaxId: 32053]}
anlwerfcnwvtstdnrlyvgwfgvimiptllaaticfviafiaappvdidgirepvsgs
llygnniitgavvpssnaiglhfypiweaasldewlynggpyqliifhfllgascymgrq
welsyrlgmrpwicvaysaplasafavfliypigqgsfsdgmplgisgtfnfmivfqaeh
nilmhpfhqlgvagvfggalfcamhgslvtsslirettetesanygykfgqeeetyniva
ahgyfgrlifqyasfnnsrslhfflaawpvvgvwfaalgistmafnlngfnfnhsvidak
gnvintwadiinranlgmevmhernahnfpldla

SCOPe Domain Coordinates for d5b5ea_:

Click to download the PDB-style file with coordinates for d5b5ea_.
(The format of our PDB-style files is described here.)

Timeline for d5b5ea_:

  • d5b5ea_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-03