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Lineage for d5kafj_ (5kaf J:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2226297Fold f.23: Single transmembrane helix [81407] (42 superfamilies)
    not a true fold
  4. 2227352Superfamily f.23.32: Photosystem II reaction center protein J, PsbJ [161021] (1 family) (S)
    automatically mapped to Pfam PF01788
  5. 2227353Family f.23.32.1: PsbJ-like [161022] (2 protein domains)
    Pfam PF01788
  6. 2227362Protein automated matches [191002] (3 species)
    not a true protein
  7. 2283986Species Thermosynechococcus elongatus [TaxId:197221] [327287] (3 PDB entries)
  8. 2284447Domain d5kafj_: 5kaf J: [327748]
    Other proteins in same PDB: d5kafa_, d5kafb_, d5kafc_, d5kafd_, d5kafe_, d5kafh_, d5kafi1, d5kafi2, d5kafk_, d5kaft1, d5kaft2, d5kafu_, d5kafv_, d5kafx_, d5kafz_
    automated match to d4ub8j_
    complexed with bcr, bct, cl, cla, dgd, fe2, hem, lhg, lmg, oex, pho, pl9, sqd, unl

Details for d5kafj_

PDB Entry: 5kaf (more details), 3 Å

PDB Description: rt xfel structure of photosystem ii in the dark state at 3.0 a resolution
PDB Compounds: (J:) Photosystem II reaction center protein J

SCOPe Domain Sequences for d5kafj_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5kafj_ f.23.32.1 (J:) automated matches {Thermosynechococcus elongatus [TaxId: 197221]}
ggriplwivatvagmgvivivglffygayaglgssl

SCOPe Domain Coordinates for d5kafj_:

Click to download the PDB-style file with coordinates for d5kafj_.
(The format of our PDB-style files is described here.)

Timeline for d5kafj_:

  • d5kafj_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-30