Lineage for d5kafo_ (5kaf o:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2224301Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
  4. 2224302Superfamily f.4.1: OMPA-like [56925] (5 families) (S)
    forms (8,10) barrel
  5. 2224344Family f.4.1.4: PsbO-like [161115] (2 protein domains)
    Pfam PF01716; MSP
  6. 2224355Protein automated matches [191004] (2 species)
    not a true protein
  7. 2224356Species Thermosynechococcus elongatus [TaxId:197221] [260553] (5 PDB entries)
  8. 2283305Domain d5kafo_: 5kaf o: [326606]
    Other proteins in same PDB: d5kaff_, d5kafl_, d5kafm1, d5kafm2
    automated match to d4il6o_
    complexed with bcr, bct, cl, cla, dgd, fe2, hem, lhg, lmg, oex, pho, pl9, sqd, unl

Details for d5kafo_

PDB Entry: 5kaf (more details), 3 Å

PDB Description: rt xfel structure of photosystem ii in the dark state at 3.0 a resolution
PDB Compounds: (o:) Photosystem II manganese-stabilizing polypeptide

SCOPe Domain Sequences for d5kafo_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5kafo_ f.4.1.4 (o:) automated matches {Thermosynechococcus elongatus [TaxId: 197221]}
qtltyddivgtglankcptlddtargaypidssqtyriarlclqpttflvkeepknkrqe
aefvptklvtrettsldqiqgelkvnsdgsltfveedgidfqpvtvqmaggeripllftv
knlvastqpnvtsittstdfkgefnvpsyrtanfldpkgrglasgydsaialpqakeeel
aranvkrfsltkgqislnvakvdgrtgeiagtfeseqlsdddmgahephevkiqgvfyas
iepa

SCOPe Domain Coordinates for d5kafo_:

Click to download the PDB-style file with coordinates for d5kafo_.
(The format of our PDB-style files is described here.)

Timeline for d5kafo_:

  • d5kafo_ appears in periodic updates to SCOPe 2.06 starting on 2016-11-25