SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Drosophila melanogaster [TaxId: 7227]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2094257Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2094258Protein automated matches [190069] (226 species)
    not a true protein
  7. 2282948Species Drosophila melanogaster [TaxId:7227] [326249] (2 PDB entries)

PDB entries in Species: Drosophila melanogaster [TaxId: 7227]:

  1. Domain(s) for 5ilg:
    1. 2282949Domain d5ilga1: 5ilg A:2-261 [326250]
      Other proteins in same PDB: d5ilga2
      automated match to d1mg5a_
      complexed with edo, iph, mg, nad
    2. 2282965Domain d5ilgb_: 5ilg B: [326266]
      Other proteins in same PDB: d5ilga2
      automated match to d1mg5a_
      complexed with edo, iph, mg, nad
  2. Domain(s) for 5ilo:
    1. 2282966Domain d5iloa1: 5ilo A:2-261 [326267]
      Other proteins in same PDB: d5iloa2, d5ilob2
      automated match to d1mg5a_
      complexed with nad
    2. 2282971Domain d5ilob1: 5ilo B:2-260 [326272]
      Other proteins in same PDB: d5iloa2, d5ilob2
      automated match to d1mg5a_
      complexed with nad

More info for Species Drosophila melanogaster [TaxId:7227] from c.2.1.0 automated matches

Timeline for Species Drosophila melanogaster [TaxId:7227] from c.2.1.0 automated matches:

  • Species Drosophila melanogaster [TaxId:7227] from c.2.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-11-17