SCOPe 2.07: Domain d5lbvb1: 5lbv B:1-303

Lineage for d5lbvb1 (5lbv B:1-303)

1. Root: SCOPe 2.07

2. Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)

3. Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
   2 intertwined domains; all-beta and alpha+beta

4. Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families)

5. Family f.10.1.0: automated matches [227258] (1 protein)
   not a true family

6. Protein automated matches [227047] (11 species)
   not a true protein

7. Species Zika virus [TaxId:64320] [317278] (7 PDB entries)

8. Domain d5lbvb1: 5lbv B:1-303 [319380]
   Other proteins in same PDB: d5lbva2, d5lbvb2
   automated match to d4gsxa1
   complexed with bma, fuc, man, na, nag

Details for d5lbvb1

PDB Entry: 5lbv, 2.2 Å

PDB Description: structural basis of zika and dengue virus potent antibody cross- neutralization

PDB Compounds: (B:) Envelope protein E

SCOPe Domain Sequences for d5lbvb1:

Sequence, based on SEQRES records:

>d5lbvb1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
kgv

Sequence, based on observed residues (ATOM records):

>d5lbvb1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldcepfsdlyyltmnnkhwlvhkewfhdiplpwhagaphwnnkealvefkdah
akrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgv

Timeline for d5lbvb1:

• d5lbvb1 first appeared in SCOPe 2.06
  
• d5lbvb1 appears in the current release, SCOPe 2.08