SCOPe 2.07: Domain d4d6ea1: 4d6e A:421-838

Lineage for d4d6ea1 (4d6e A:421-838)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (156 species)
   not a true protein

7. Species Streptococcus pneumoniae [TaxId:406556] [311248] (13 PDB entries)

8. Domain d4d6ea1: 4d6e A:421-838 [307215]
   Other proteins in same PDB: d4d6ea2, d4d6ea3
   automated match to d2wmfa1
   complexed with edo, so4; mutant

Details for d4d6ea1

PDB Entry: 4d6e, 1.45 Å

PDB Description: crystal structure of a family 98 glycoside hydrolase catalytic module (sp3gh98) in complex with the blood group a-trisaccharide (x01 mutant)

PDB Compounds: (A:) glycoside hydrolase

SCOPe Domain Sequences for d4d6ea1:

Sequence, based on SEQRES records:

>d4d6ea1 c.37.1.0 (A:421-838) automated matches {Streptococcus pneumoniae [TaxId: 406556]}
evdkrreinnehpllmmplyangeefnqgkytfwggdtltgkwenipddlkpytviqlhp
ddlpkrdgaardfyehmleeaakyvnpktgknepipviltvytagnmpyytsahwlstsw
idkmyqkypnlhgifstesywiwandienkaadylkvsaknggyfiwaeqnvgsaiekaf
gkngkiafqksvdkywknlifmfkntpaaegndsttesymkglwlsnhtyqwgglmdtwk
wyetgkwklfasgnigksqgdrqwltepesmlgeealgvylnggvvynfehpaytygvnn
kesllfsevikeffryviahpapskekvledtkvfihgdysnkgngkffvnvntdreqtp
lymtgrynvipaipgvlktdklkesvsssriqikeitspefsstqarkeylnklypmn

Sequence, based on observed residues (ATOM records):

>d4d6ea1 c.37.1.0 (A:421-838) automated matches {Streptococcus pneumoniae [TaxId: 406556]}
evdkrreinnehpllmmplyangeefnqgkytfwggdtltgkwenipddlkpytviqlhp
ddlpkrdgaardfyehmleeaakyvnpktgknepipviltvytagnmpyytsahwlstsw
idkmyqkypnlhgifstesywiwandienkaadylkvsaknggyfiwaeqnvgsaiekaf
gkngkiafqksvdkywknlifmfkntpaaegndsttesymkglwlsnhtyqwgglmdtwk
wyetgkwklfasgnigksqgdrqwltepesmlgeealgvylnggvvynfehpaytygvnn
kesllfsevikeffryviahpapskekvledtkvfihgdysnkgngkffvnvntdreqtp
lymtgrynvipaipgvlktdkliqikeitspefsstqarkeylnklypmn

Timeline for d4d6ea1:

• d4d6ea1 first appeared in SCOPe 2.06
  
• d4d6ea1 appears in the current release, SCOPe 2.08