SCOPe 2.04: Domain d1a0db_: 1a0d B:

Lineage for d1a0db_ (1a0d B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (13 species)

7. Species Bacillus stearothermophilus [TaxId:1422] [51675] (1 PDB entry)

8. Domain d1a0db_: 1a0d B: [29534]
   complexed with mn

Details for d1a0db_

PDB Entry: 1a0d, 3 Å

PDB Description: xylose isomerase from bacillus stearothermophilus

PDB Compounds: (B:) xylose isomerase

SCOPe Domain Sequences for d1a0db_:

Sequence; same for both SEQRES and ATOM records:

>d1a0db_ c.1.15.3 (B:) D-xylose isomerase {Bacillus stearothermophilus [TaxId: 1422]}
pyfdnistiayegpasknplafkfynpeekvgdktmeehlrfsvaywhtftgdgsdpfga
gnmirpwnkysgmdlakarveaafeffeklnipffcfhdvdiapegetlketyknldiiv
dmieeymktsktkllwntanlfthprfvhgaatscnadvfayaaakvkkgleiakrlgae
nyvfwggregyetllntdmkleldnlarflhmavdyakeigfdgqfliepkpkeptkhqy
dfdvatalaflqtyglkdyfkfnieanhatlaghtfehelrvarihgmlgsvdanqgdml
lgwdtdefptdlysttlamyeilkngglgrgglnfdakvrrgsfepedlfyahiagmdsf
avglkvahrliedrvfdefieeryksytegigreivegtadfhkleahalqlgeiqnqsg
rqerlktllnqyllevc

Timeline for d1a0db_:

• d1a0db_ first appeared (with stable ids) in SCOP 1.55
  
• d1a0db_ appears in SCOPe 2.03
  
• d1a0db_ appears in SCOPe 2.05
  
• d1a0db_ appears in the current release, SCOPe 2.08