SCOPe 2.03: Domain d5bcad2: 5bca D:1-417

Lineage for d5bcad2 (5bca D:1-417)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Bacterial beta-amylase [51485] (1 species)
   protein contains additional starch-binding domain

7. Species Bacillus cereus [TaxId:1396] [51486] (14 PDB entries)

8. Domain d5bcad2: 5bca D:1-417 [28802]
   Other proteins in same PDB: d5bcaa1, d5bcab1, d5bcac1, d5bcad1
   complexed with ca

Details for d5bcad2

PDB Entry: 5bca, 2.2 Å

PDB Description: beta-amylase from bacillus cereus var. mycoides

PDB Compounds: (D:) protein (1,4-alpha-d-glucan maltohydrolase.)

SCOPe Domain Sequences for d5bcad2:

Sequence; same for both SEQRES and ATOM records:

>d5bcad2 c.1.8.1 (D:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]}
avngkgmnpdykaylmaplkkipevtnwetfendlrwakqngfyaitvdfwwgdmekngd
qqfdfsyaqrfaqsvknagmkmipiisthqcggnvgddcnvpipswvwnqksddslyfks
etgtvnketlnplasdvirkeygelytafaaamkpykdviakiylsggpagelrypsytt
sdgtgypsrgkfqaytefakskfrlwvlnkygslnevnkawgtkliselailppsdgeqf
lmngylsmygkdylewyqgilenhtkligelahnafdttfqvpigakiagvhwqynnpti
phgaekpagyndyshlldafksakldvtftclemtdkgsypeysmpktlvqniatlanek
givlngenalsigneeeykrvaemafnynfagftllryqdvmynnslmgkfkdllgv

Timeline for d5bcad2:

• d5bcad2 first appeared (with stable ids) in SCOP 1.55
  
• d5bcad2 appears in SCOPe 2.02
  
• d5bcad2 appears in SCOPe 2.04
  
• d5bcad2 appears in the current release, SCOPe 2.08