Lineage for d1cyga4 (1cyg A:1-402)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2830058Protein Cyclodextrin glycosyltransferase [51452] (5 species)
    contains two more all-beta domains, one is Immunoglobulin-like and the other is trasthyretin-like
  7. 2830117Species Bacillus stearothermophilus [TaxId:1422] [51454] (1 PDB entry)
  8. 2830118Domain d1cyga4: 1cyg A:1-402 [28737]
    Other proteins in same PDB: d1cyga1, d1cyga2, d1cyga3
    complexed with ca
    has additional subdomain(s) that are not in the common domain

Details for d1cyga4

PDB Entry: 1cyg (more details), 2.5 Å

PDB Description: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase)
PDB Compounds: (A:) cyclodextrin glucanotransferase

SCOPe Domain Sequences for d1cyga4:

Sequence; same for both SEQRES and ATOM records: (download)

>d1cyga4 c.1.8.1 (A:1-402) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
agnlnkvnftsdvvyqivvdrfvdgntsnnpsgalfssgctnlrkycggdwqgiinkind
gyltdmgvtaiwisqpvenvfsvmndasgsasyhgywardfkkpnpffgtlsdfqrlvda
ahakgikviidfapnhtspasetnpsymengrlydngtllggytndanmyfhhnggttfs
sledgiyrnlfdladlnhqnpvidrylkdavkmwidmgidgirmdavkhmpfgwqkslmd
eidnyrpvftfgewflsenevdannhyfanesgmslldfrfgqklrqvlrnnsdnwygfn
qmiqdtasaydevldqvtfidnhdmdrfmidggdprkvdmalavlltsrgvpniyygteq
ymtgngdpnnrkmmssfnkntrayqviqklsslrrnnpalay

SCOPe Domain Coordinates for d1cyga4:

Click to download the PDB-style file with coordinates for d1cyga4.
(The format of our PDB-style files is described here.)

Timeline for d1cyga4: