SCOPe 2.07: Domain d3obra2: 3obr A:1068-1276

Lineage for d3obra2 (3obr A:1068-1276)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.42: beta-Trefoil [50352] (8 superfamilies)
   barrel, closed; n=6, S=12; and a hairpin triplet; meander
   duplication: has internal pseudo threefold symmetry

4. Superfamily b.42.4: STI-like [50386] (3 families)

5. Family b.42.4.0: automated matches [191368] (1 protein)
   not a true family

6. Protein automated matches [190445] (10 species)
   not a true protein

7. Species Clostridium botulinum [TaxId:1491] [225676] (22 PDB entries)

8. Domain d3obra2: 3obr A:1068-1276 [265111]
   Other proteins in same PDB: d3obra1, d3obra3, d3obra4
   automated match to d3ogga2
   complexed with gol

Details for d3obra2

PDB Entry: 3obr, 1.72 Å

PDB Description: Crystal structure of Botulinum neurotoxin serotype D binding domain

PDB Compounds: (A:) Botulinum neurotoxin type D

SCOPe Domain Sequences for d3obra2:

Sequence, based on SEQRES records:

>d3obra2 b.42.4.0 (A:1068-1276) automated matches {Clostridium botulinum [TaxId: 1491]}
snedinivyegqilrnvikdywgnplkfdteyyiindnyidryiapesnvlvlvqypdrs
klytgnpitiksvsdknpysrilngdniilhmlynsrkymiirdtdtiyatqggecsqnc
vyalklqsnlgnygigifsiknivsknkycsqifssfrentmlladiykpwrfsfknayt
pvavtnyetkllstssfwkfisrdpgwve

Sequence, based on observed residues (ATOM records):

>d3obra2 b.42.4.0 (A:1068-1276) automated matches {Clostridium botulinum [TaxId: 1491]}
snedinivyegqilrnvikdywgnplkfdteyyiindnyidryiapesnvlvlvqypdrs
klytgnpitiksvsdknpysrilngdniilhmlynsrkymiirdtdtiyatqecsqncvy
alklqsnlgnygigifsiknivsknkycsqifssfrentmlladiykpwrfsfknaytpv
avtnyetkllstssfwkfisrdpgwve

Timeline for d3obra2:

• d3obra2 first appeared in SCOPe 2.05
  
• d3obra2 appears in SCOPe 2.06
  
• d3obra2 appears in the current release, SCOPe 2.08