SCOPe 2.07: Domain d2kcqa1: 2kcq A:1-145

Lineage for d2kcqa1 (2kcq A:1-145)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.3: JAB1/MPN domain [102712] (2 families)

5. Family c.97.3.1: JAB1/MPN domain [102713] (8 proteins)
   Pfam PF01398; Pfam PF14464; synonyms Mov34, PAD-1. PubMed 17559875 asserts homology to (c.97.1)

6. Protein SRU_2040 [267643] (1 species)

7. Species Salinibacter ruber DSM 13855 [TaxId:309807] [267702] (1 PDB entry)

8. Domain d2kcqa1: 2kcq A:1-145 [264348]
   Other proteins in same PDB: d2kcqa2

Details for d2kcqa1

PDB Entry: 2kcq

PDB Description: solution structure of protein sru_2040 from salinibacter ruber (strain dsm 13855) . northeast structural genomics consortium target srr106

PDB Compounds: (A:) Mov34/MPN/PAD-1 family

SCOPe Domain Sequences for d2kcqa1:

Sequence; same for both SEQRES and ATOM records:

>d2kcqa1 c.97.3.1 (A:1-145) SRU_2040 {Salinibacter ruber DSM 13855 [TaxId: 309807]}
mkttpdildqirvhgadaypeegcgfllgtvtddgdnrvaalhratnrrseqrtrryelt
addyraadaaaqeqgldvvgvyhshpdhparpsatdleeatfpgftyvivsvrdgapeal
tawalapdrsefhredivrpdpeap

Timeline for d2kcqa1:

• d2kcqa1 first appeared in SCOPe 2.05, called d2kcqa_
  
• d2kcqa1 appears in SCOPe 2.06
  
• d2kcqa1 appears in the current release, SCOPe 2.08