SCOPe 2.04: Domain d3wj5b_: 3wj5 B:

Lineage for d3wj5b_ (3wj5 B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator activated receptor gamma, PPAR-gamma [48524] (1 species)
7. Species Human (Homo sapiens) [TaxId:9606] [48525] (85 PDB entries)
   Uniprot P37231 232-505

8. Domain d3wj5b_: 3wj5 B: [260472]
   automated match to d1wm0x_
   protein/DNA complex; complexed with t9t

Details for d3wj5b_

PDB Entry: 3wj5, 1.89 Å

PDB Description: crystal structure of ppargamma ligand binding domain in complex with triphenyltin

PDB Compounds: (B:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d3wj5b_:

Sequence, based on SEQRES records:

>d3wj5b_ a.123.1.1 (B:) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
gplgsesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedk
ikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkyg
vheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleldd
sdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtd
lrqivtehvqllqvikktetdmslhpllqeiykd

Sequence, based on observed residues (ATOM records):

>d3wj5b_ a.123.1.1 (B:) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
gplgsesadlralakhlydsyiksfpltkakarailtgkkspfviydmnslmmgedkikf
khkevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlas
lmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiavii
lsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvql
lqvikktehpllqeiykd

Timeline for d3wj5b_:

• d3wj5b_ is new in SCOPe 2.04-stable
  
• d3wj5b_ appears in SCOPe 2.05
  
• d3wj5b_ appears in the current release, SCOPe 2.08, called d3wj5b1