Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2072005Fold b.84: Barrel-sandwich hybrid [51229] (5 superfamilies)
    sandwich of half-barrel shaped beta-sheets
  4. 2072108Superfamily b.84.2: Rudiment single hybrid motif [51246] (3 families) (S)
  5. 2072233Family b.84.2.0: automated matches [254217] (1 protein)
    not a true family
  6. 2072234Protein automated matches [254496] (13 species)
    not a true protein

Species:

  1. 2072235Aquifex aeolicus [TaxId:63363] [255714] (2 PDB entries)
    1. Domains for 2yw2:
      1. 2072236Domain d2yw2a3: 2yw2 A:323-423 [244838]
        Other proteins in same PDB: d2yw2a1, d2yw2a2, d2yw2b1, d2yw2b2
        automated match to d1gsoa1
        complexed with atp, po4
      2. 2072237Domain d2yw2b3: 2yw2 B:323-423 [244841]
        Other proteins in same PDB: d2yw2a1, d2yw2a2, d2yw2b1, d2yw2b2
        automated match to d1gsoa1
        complexed with atp, po4
    2. Domains for 2yya:
      1. 2072238Domain d2yyaa3: 2yya A:323-423 [244884]
        Other proteins in same PDB: d2yyaa1, d2yyaa2, d2yyab1, d2yyab2
        automated match to d1gsoa1
      2. 2072239Domain d2yyab3: 2yya B:323-423 [244887]
        Other proteins in same PDB: d2yyaa1, d2yyaa2, d2yyab1, d2yyab2
        automated match to d1gsoa1
  2. 2072240Campylobacter jejuni [TaxId:192222] [256008] (2 PDB entries)
    1. Domains for 3ouu:
      1. 2072243Domain d3ouua3: 3ouu A:330-443 [248342]
        Other proteins in same PDB: d3ouua1, d3ouua2, d3ouua4, d3ouub1, d3ouub2
        automated match to d1ulza1
        complexed with anp, ca, cac, fmt, gol
      2. 2072244Domain d3ouub3: 3ouu B:330-443 [248345]
        Other proteins in same PDB: d3ouua1, d3ouua2, d3ouua4, d3ouub1, d3ouub2
        automated match to d1ulza1
        complexed with anp, ca, cac, fmt, gol
    2. Domains for 3ouz:
      1. 2072241Domain d3ouza3: 3ouz A:330-443 [248348]
        Other proteins in same PDB: d3ouza1, d3ouza2, d3ouza4, d3ouzb1, d3ouzb2
        automated match to d1ulza1
        complexed with adp, fmt, gol, mg, mlt, srt, tla
      2. 2072242Domain d3ouzb3: 3ouz B:330-443 [248351]
        Other proteins in same PDB: d3ouza1, d3ouza2, d3ouza4, d3ouzb1, d3ouzb2
        automated match to d1ulza1
        complexed with adp, fmt, gol, mg, mlt, srt, tla
  3. 2072245Ehrlichia chaffeensis [TaxId:205920] [255936] (1 PDB entry)
  4. 2072247Escherichia coli K-12 [TaxId:83333] [255843] (2 PDB entries)
    1. Domains for 3g8c:
      1. 2072250Domain d3g8ca3: 3g8c A:331-444 [246262]
        Other proteins in same PDB: d3g8ca1, d3g8ca2, d3g8cb1, d3g8cb2
        automated match to d2w70a3
        complexed with adp, bct, btn, mg
      2. 2072251Domain d3g8cb3: 3g8c B:331-444 [246265]
        Other proteins in same PDB: d3g8ca1, d3g8ca2, d3g8cb1, d3g8cb2
        automated match to d2w70a3
        complexed with adp, bct, btn, mg
    2. Domains for 3g8d:
      1. 2072248Domain d3g8da2: 3g8d A:331-444 [246267]
        Other proteins in same PDB: d3g8da1, d3g8db1, d3g8db2
        automated match to d2w70a3
        complexed with adp, mg, so4; mutant
      2. 2072249Domain d3g8db3: 3g8d B:331-444 [246270]
        Other proteins in same PDB: d3g8da1, d3g8db1, d3g8db2
        automated match to d2w70a3
        complexed with adp, mg, so4; mutant
  5. 2072252Geobacillus kaustophilus [TaxId:1462] [255711] (4 PDB entries)
    1. Domain for 2yrw:
    2. Domain for 2yrx:
    3. Domain for 2ys6:
    4. Domain for 2ys7:
  6. 2072257Geobacillus thermodenitrificans [TaxId:33940] [255127] (1 PDB entry)
  7. 2072260Haemophilus influenzae [TaxId:71421] [268355] (8 PDB entries)
    1. Domain for 4mv1:
    2. Domain for 4mv3:
    3. Domain for 4mv4:
    4. Domain for 4mv6:
    5. Domain for 4mv7:
    6. Domain for 4mv8:
    7. Domain for 4mv9:
    8. Domain for 4rzq:
  8. 2072269Human (Homo sapiens) [TaxId:9606] [255567] (1 PDB entry)
  9. 2072272Pseudomonas aeruginosa [TaxId:287] [255074] (2 PDB entries)
    1. Domains for 2c00:
      1. 2072274Domain d2c00a3: 2c00 A:331-445 [241399]
        Other proteins in same PDB: d2c00a1, d2c00a2, d2c00b1, d2c00b2
        automated match to d2w70a3
        complexed with so4
      2. 2072275Domain d2c00b3: 2c00 B:331-445 [241402]
        Other proteins in same PDB: d2c00a1, d2c00a2, d2c00b1, d2c00b2
        automated match to d2w70a3
        complexed with so4
    2. Domain for 2vqd:
  10. 2072276Staphylococcus aureus [TaxId:1280] [255619] (1 PDB entry)
  11. 2072279Yersinia pestis [TaxId:214092] [255971] (1 PDB entry)
  12. 2287449Mycobacterium tuberculosis [TaxId:83332] [330750] (1 PDB entry)
  13. 2289786Neisseria gonorrhoeae [TaxId:521006] [333087] (1 PDB entry)

More info for Protein automated matches from b.84.2.0: automated matches

Timeline for Protein automated matches from b.84.2.0: automated matches: