SCOPe 2.07: Domain d1r1a3_: 1r1a 3:

Lineage for d1r1a3_ (1r1a 3:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

6. Protein Rhinovirus coat proteins [49670] (5 species)

7. Species Human rhinovirus A 1A (HRV-1A) [TaxId:12134] [49673] (4 PDB entries)

8. Domain d1r1a3_: 1r1a 3: [23539]
   complexed with suc

Details for d1r1a3_

PDB Entry: 1r1a, 3.2 Å

PDB Description: crystal structure of human rhinovirus serotype 1a (hrv1a)

PDB Compounds: (3:) human rhinovirus 1a coat protein (subunit vp3)

SCOPe Domain Sequences for d1r1a3_:

Sequence; same for both SEQRES and ATOM records:

>d1r1a3_ b.121.4.1 (3:) Rhinovirus coat proteins {Human rhinovirus A 1A (HRV-1A) [TaxId: 12134]}
glpvyitpgsgqfmttddmqspcalpwyhptkeisipgevknliemcqvdtlipvnnvgn
nvgnvsmytvqlgnqtgmaqkvfsikvditstplattligeiasyythwtgslrfsfmfc
gtanttlklllaytppgidepttrkdamlgthvvwdvglqstislvvpwvsashfrltad
nkysmagyitcwyqtnlvvppstpqtadmlcfvsackdfclrmardtdlhiqsgpieq

Timeline for d1r1a3_:

• d1r1a3_ first appeared (with stable ids) in SCOP 1.55
  
• d1r1a3_ appears in SCOPe 2.06
  
• d1r1a3_ appears in the current release, SCOPe 2.08