SCOPe 2.07: Domain d2yfha2: 2yfh A:196-448

Lineage for d2yfha2 (2yfh A:196-448)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (309 species)
   not a true protein

7. Species Clostridium symbiosum [TaxId:1512] [231640] (1 PDB entry)

8. Domain d2yfha2: 2yfh A:196-448 [231652]
   Other proteins in same PDB: d2yfha1, d2yfhb1, d2yfhc1, d2yfhd1, d2yfhe1, d2yfhf1
   automated match to d1bgva1

Details for d2yfha2

PDB Entry: 2yfh, 2.7 Å

PDB Description: structure of a chimeric glutamate dehydrogenase

PDB Compounds: (A:) glutamate dehydrogenase, nad-specific glutamate dehydrogenase, glutamate dehydrogenase

SCOPe Domain Sequences for d2yfha2:

Sequence, based on SEQRES records:

>d2yfha2 c.2.1.0 (A:196-448) automated matches {Clostridium symbiosum [TaxId: 1512]}
karsfggslirpeatgyglvyfteamlkrhgmgfegmrvsvsgsgnvaqyaiekamefga
rvitasdssgtvvdesgftkeklarlieikasrdgrvadyakefglvylegqqpwslpvd
ialpcatqneldvdaahqliangvkavaeganmpttieatelfqqagvlfapgkaanagg
vatsglemaqnaarlgwkaekvdarlhhimtdihdgsaaaaeryglgynlvaganivgfq
kiadammaqgiaw

Sequence, based on observed residues (ATOM records):

>d2yfha2 c.2.1.0 (A:196-448) automated matches {Clostridium symbiosum [TaxId: 1512]}
karsfggslirpeatgyglvyfteamlkrhgmgfegmrvsvsgsgnvaqyaiekamefga
rvitasdssgtvvdesgftkeklarlieidgrvadyakefglvylegqqpwslpvdialp
catqneldvdaahqliangvkavaeganmpttieatelfqqagvlfapgkaanaggvats
glemaqnaarlgwkaekvdarlhhimtdihdgsaaaaeryglgynlvaganivgfqkiad
ammaqgiaw

Timeline for d2yfha2:

• d2yfha2 first appeared in SCOPe 2.03
  
• d2yfha2 appears in SCOPe 2.06
  
• d2yfha2 appears in the current release, SCOPe 2.08