SCOPe 2.07: Domain d4jb9l2: 4jb9 L:103-209

Lineage for d4jb9l2 (4jb9 L:103-209)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (17 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187221] (1235 PDB entries)

8. Domain d4jb9l2: 4jb9 L:103-209 [223673]
   Other proteins in same PDB: d4jb9l1
   automated match to d1rhha2
   complexed with nag

Details for d4jb9l2

PDB Entry: 4jb9, 2.6 Å

PDB Description: crystal structure of antibody vrc06 in complex with hiv-1 gp120 core

PDB Compounds: (L:) antibody VRC06 light chain

SCOPe Domain Sequences for d4jb9l2:

Sequence; same for both SEQRES and ATOM records:

>d4jb9l2 b.1.1.2 (L:103-209) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

Timeline for d4jb9l2:

• d4jb9l2 first appeared in SCOPe 2.03
  
• d4jb9l2 appears in SCOPe 2.06
  
• d4jb9l2 appears in the current release, SCOPe 2.08