SCOPe 2.07: Domain d4dqxd1: 4dqx D:23-275

Lineage for d4dqxd1 (4dqx D:23-275)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (309 species)
   not a true protein

7. Species Rhizobium etli [TaxId:347834] [226316] (3 PDB entries)

8. Domain d4dqxd1: 4dqx D:23-275 [219961]
   Other proteins in same PDB: d4dqxa2, d4dqxc2, d4dqxd2
   automated match to d2c07a1

Details for d4dqxd1

PDB Entry: 4dqx, 2 Å

PDB Description: crystal structure of a short chain dehydrogenase from rhizobium etli cfn 42

PDB Compounds: (D:) Probable oxidoreductase protein

SCOPe Domain Sequences for d4dqxd1:

Sequence, based on SEQRES records:

>d4dqxd1 c.2.1.0 (D:23-275) automated matches {Rhizobium etli [TaxId: 347834]}
mdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrvdv
ssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcsky
vipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvnava
pgtidspyftkifaeakdpaklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgsi
ltvdggssignhl

Sequence, based on observed residues (ATOM records):

>d4dqxd1 c.2.1.0 (D:23-275) automated matches {Rhizobium etli [TaxId: 347834]}
mdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrvdv
ssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcsky
vipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvnava
pgtidspyftkifaeklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgsiltvdg
gssignhl

Timeline for d4dqxd1:

• d4dqxd1 first appeared in SCOPe 2.03, called d4dqxd_
  
• d4dqxd1 appears in SCOPe 2.06
  
• d4dqxd1 appears in the current release, SCOPe 2.08