Lineage for d3vina_ (3vin A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2438500Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2441004Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2441005Protein automated matches [190075] (125 species)
    not a true protein
  7. 2441536Species Neotermes koshunensis [TaxId:60586] [189411] (13 PDB entries)
  8. 2441545Domain d3vina_: 3vin A: [217848]
    automated match to d3ai0a_
    complexed with cl, gbh, gol, na

Details for d3vina_

PDB Entry: 3vin (more details), 1.13 Å

PDB Description: crystal structure of beta-glucosidase from termite neotermes koshunensis in complex with a new glucopyranosidic product
PDB Compounds: (A:) Beta-glucosidase

SCOPe Domain Sequences for d3vina_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vina_ c.1.8.0 (A:) automated matches {Neotermes koshunensis [TaxId: 60586]}
tvytfpdefklgaatasyqiegawdengkgpniwdtlthehpdyvvdgatgdiaddsyhl
ykedvkilkelgaqvyrfsiswarvlpeghdnivnqdgidyynnlinellangiepmvtm
yhwdlpqalqdlggwpnlvlakysenyarvlfknfgdrvklwltfndpltfmdgyaseig
mapsintpgigdylaahtvihahariyhlydqefraeqggkvgislninwcepatnsaed
rascenyqqfnlglyahpifteegdypavlkdrvsrnsadegytdsrlpqftaeeveyir
gthdflginfytallgksgvegyepsryrdsgviltqdaawpisasswlkvvpwgfrkel
nwikneynnppvfitengfsdygglndtgrvhyytehlkemlkaihedgvnvigytawsl
mdnfewlrgysekfgiyavdfedparpripkesakvlaeimntrkiperfrd

SCOPe Domain Coordinates for d3vina_:

Click to download the PDB-style file with coordinates for d3vina_.
(The format of our PDB-style files is described here.)

Timeline for d3vina_: