SCOPe 2.07: Domain d3upbb_: 3upb B:

Lineage for d3upbb_ (3upb B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.0: automated matches [191319] (1 protein)
   not a true family

6. Protein automated matches [190115] (91 species)
   not a true protein

7. Species Francisella tularensis [TaxId:119856] [196145] (6 PDB entries)

8. Domain d3upbb_: 3upb B: [217470]
   automated match to d3igxb_
   complexed with a5p, p6g, peg, pge

Details for d3upbb_

PDB Entry: 3upb, 1.5 Å

PDB Description: 1.5 angstrom resolution crystal structure of transaldolase from francisella tularensis in covalent complex with arabinose-5-phosphate

PDB Compounds: (B:) Transaldolase

SCOPe Domain Sequences for d3upbb_:

Sequence, based on SEQRES records:

>d3upbb_ c.1.10.0 (B:) automated matches {Francisella tularensis [TaxId: 119856]}
ksvleqlkqvtmvvadtgdfelikkykpvdattnpslilkavkeqkysnlvaetiskvka
nnpdlnsddlvkeiaieilvsfgikildviegkvssevdarvsfnsattidyakriiary
esngipkdrvlikiaatwegikaakllqkegincnltlifdkaqakacaeagvylvspfv
gritdwqmqqnnlktfpaiadddgvnsvkaiyklykshgfktivmgasfrnveqvialag
cdaltispvlleelknrdehlevkltknddvvtqspqiseadfrwlmnenamathklaeg
irlftkdtieleniikqnl

Sequence, based on observed residues (ATOM records):

>d3upbb_ c.1.10.0 (B:) automated matches {Francisella tularensis [TaxId: 119856]}
ksvleqlkqvtmvvadtgdfelikkykpvdattnpslilkavkeqkysnlvaetiskvka
nnpdlnsddlvkeiaieilvsfgikildviegkvssevdarvsfnsattidyakriiary
esngipkdrvlikiaatwegikaakllqkegincnltlifdkaqakacaeagvylvspfv
gritdwqmqqnnlktfpaiadddgvnsvkaiyklykshgfktivmgasfrnveqvialag
cdaltispvlleelknrdehlevkltqiseadfrwlmnenamathklaegirlftkdtie
leniikqnl

Timeline for d3upbb_:

• d3upbb_ first appeared in SCOPe 2.03
  
• d3upbb_ appears in SCOPe 2.06
  
• d3upbb_ appears in the current release, SCOPe 2.08