SCOPe 2.07: Domain d2d39b1: 2d39 B:115-326

Lineage for d2d39b1 (2d39 B:115-326)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.171: Fibrinogen C-terminal domain-like [56495] (1 superfamily)
   unusual fold

4. Superfamily d.171.1: Fibrinogen C-terminal domain-like [56496] (2 families)

5. Family d.171.1.0: automated matches [191465] (1 protein)
   not a true family

6. Protein automated matches [190726] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187887] (49 PDB entries)

8. Domain d2d39b1: 2d39 B:115-326 [203893]
   Other proteins in same PDB: d2d39a2, d2d39b2
   automated match to d2j1gd_
   complexed with ca

Details for d2d39b1

PDB Entry: 2d39, 1.9 Å

PDB Description: Trivalent Recognition Unit of Innate Immunity System; Crystal Structure of human M-ficolin Fibrinogen-like Domain

PDB Compounds: (B:) ficolin-1

SCOPe Domain Sequences for d2d39b1:

Sequence, based on SEQRES records:

>d2d39b1 d.171.1.0 (B:115-326) automated matches {Human (Homo sapiens) [TaxId: 9606]}
prnckdlldrgyflsgwhtiylpdcrpltvlcdmdtdgggwtvfqrrmdgsvdfyrdwaa
ykqgfgsqlgefwlgndnihaltaqgsselrvdlvdfegnhqfakyksfkvadeaekykl
vlgafvggsagnsltghnnnffstkdqdndvsssncaekfqgawwyadchasnlnglylm
gphesyanginwsaakgykysykvsemkvrpa

Sequence, based on observed residues (ATOM records):

>d2d39b1 d.171.1.0 (B:115-326) automated matches {Human (Homo sapiens) [TaxId: 9606]}
prnckdlldrgyflsgwhtiylpdcrpltvlcdmdtdgggwtvfqrrmdgsvdfyrdwaa
ykqgfgsqlgefwlgndnihaltaqgsselrvdlvdfegnhqfakyksfkvadeaekykl
vlgafvggsagnsltghnnnffstkdqdndvsssncaekfqgawwyadchasnlnglyla
nginwsysykvsemkvrpa

Timeline for d2d39b1:

• d2d39b1 first appeared in SCOPe 2.03, called d2d39b_
  
• d2d39b1 appears in SCOPe 2.06
  
• d2d39b1 appears in the current release, SCOPe 2.08