SCOPe 2.04: Domain d1ubva_: 1ubv A:

Lineage for d1ubva_ (1ubv A:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)

6. Protein Farnesyl diphosphate synthase (geranyltranstransferase) [48578] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [48579] (5 PDB entries)

8. Domain d1ubva_: 1ubv A: [19437]

Details for d1ubva_

PDB Entry: 1ubv, 2.5 Å

PDB Description: structure of farnesyl pyrophosphate synthetase

PDB Compounds: (A:) Farnesyl Diphosphate Synthase

SCOPe Domain Sequences for d1ubva_:

Sequence; same for both SEQRES and ATOM records:

>d1ubva_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Chicken (Gallus gallus) [TaxId: 9031]}
spvvverereefvgffpqivrdltedgighpevgdavarlkevlqynapggkcnrgltvv
aayrelsgpgqkdaeslrcalavgwcielfqaaslvaddimdqsltrrgqlcwykkegvg
ldaindsfllessvyrvlkkycrqrpyyvhllelflqtayqtelgqmldlitapvskvdl
shfseerykaivkyktafysfylpvaaamymvgidskeehenakaillemgeyfqiqddy
ldcfgdpaltgavgtdiqdnkcswlvvqclqrvtpeqrqllednygrkepekvakvkely
eavgmraafqqyeessyrrlqeliekhsnrlpkeiflglaqkiykrqk

Timeline for d1ubva_:

• d1ubva_ first appeared (with stable ids) in SCOP 1.55, called d1ubv__
  
• d1ubva_ appears in SCOPe 2.03
  
• d1ubva_ appears in SCOPe 2.05
  
• d1ubva_ appears in the current release, SCOPe 2.08