SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.43: CoA-dependent acyltransferases [52776] (1 superfamily)
core: 2 layers, a/b; mixed beta-sheet of 6 strands, order 324561; strands 3 & 6 are antiparallel to the rest
Superfamily c.43.1: CoA-dependent acyltransferases [52777] (5 families)
Family c.43.1.0: automated matches [191456] (1 protein)
not a true family
Protein automated matches [190703] (7 species)
not a true protein

Species:

Bacteroides thetaiotaomicron [TaxId:226186] [187847] (1 PDB entry)
- Domains for 2i9d:
  1. Domain d2i9da_: 2i9d A: [165444]
    Other proteins in same PDB: d2i9db2, d2i9dc2
    automated match to d1qcaa_
  2. Domain d2i9db1: 2i9d B:1-214 [165445]
    Other proteins in same PDB: d2i9db2, d2i9dc2
    automated match to d1qcaa_
  3. Domain d2i9dc1: 2i9d C:1-214 [165446]
    Other proteins in same PDB: d2i9db2, d2i9dc2
    automated match to d1qcaa_
Cow (Bos taurus) [TaxId:9913] [255239] (4 PDB entries)
1. Domains for 2ihw:
  1. Domain d2ihwa_: 2ihw A: [242129]
    automated match to d3maec_
    complexed with act, cl
  2. Domain d2ihwb_: 2ihw B: [242130]
    automated match to d3maec_
    complexed with act, cl
  3. Domain d2ihwc_: 2ihw C: [242131]
    automated match to d3maec_
    complexed with act, cl
  4. Domain d2ihwd_: 2ihw D: [242132]
    automated match to d3maec_
    complexed with act, cl
  5. Domain d2ihwe_: 2ihw E: [242133]
    automated match to d3maec_
    complexed with act, cl
  6. Domain d2ihwf_: 2ihw F: [242134]
    automated match to d3maec_
    complexed with act, cl
  7. Domain d2ihwg_: 2ihw G: [242135]
    automated match to d3maec_
    complexed with act, cl
  8. Domain d2ihwh_: 2ihw H: [242136]
    automated match to d3maec_
    complexed with act, cl
2. Domains for 2ii3:
  1. Domain d2ii3a_: 2ii3 A: [242137]
    automated match to d3maec_
    complexed with act, cao, cl
  2. Domain d2ii3b_: 2ii3 B: [242138]
    automated match to d3maec_
    complexed with act, cao, cl
  3. Domain d2ii3c_: 2ii3 C: [242139]
    automated match to d3maec_
    complexed with act, cao, cl
  4. Domain d2ii3d_: 2ii3 D: [242140]
    automated match to d3maec_
    complexed with act, cao, cl
  5. Domain d2ii3e_: 2ii3 E: [242141]
    automated match to d3maec_
    complexed with act, cao, cl
  6. Domain d2ii3f_: 2ii3 F: [242142]
    automated match to d3maec_
    complexed with act, cao, cl
  7. Domain d2ii3g_: 2ii3 G: [242143]
    automated match to d3maec_
    complexed with act, cao, cl
  8. Domain d2ii3h_: 2ii3 H: [242144]
    automated match to d3maec_
    complexed with act, cao, cl
3. Domains for 2ii4:
  1. Domain d2ii4a_: 2ii4 A: [242145]
    automated match to d3maec_
    complexed with cl, coa
  2. Domain d2ii4b_: 2ii4 B: [242146]
    automated match to d3maec_
    complexed with cl, coa
  3. Domain d2ii4c_: 2ii4 C: [242147]
    automated match to d3maec_
    complexed with cl, coa
  4. Domain d2ii4d_: 2ii4 D: [242148]
    automated match to d3maec_
    complexed with cl, coa
  5. Domain d2ii4e_: 2ii4 E: [242149]
    automated match to d3maec_
    complexed with cl, coa
  6. Domain d2ii4f_: 2ii4 F: [242150]
    automated match to d3maec_
    complexed with cl, coa
  7. Domain d2ii4g_: 2ii4 G: [242151]
    automated match to d3maec_
    complexed with cl, coa
  8. Domain d2ii4h_: 2ii4 H: [242152]
    automated match to d3maec_
    complexed with cl, coa
4. Domains for 2ii5:
  1. Domain d2ii5a_: 2ii5 A: [242153]
    automated match to d3maec_
    complexed with act, cl, co6
  2. Domain d2ii5b_: 2ii5 B: [242154]
    automated match to d3maec_
    complexed with act, cl, co6
  3. Domain d2ii5c_: 2ii5 C: [242155]
    automated match to d3maec_
    complexed with act, cl, co6
  4. Domain d2ii5d_: 2ii5 D: [242156]
    automated match to d3maec_
    complexed with act, cl, co6
  5. Domain d2ii5e_: 2ii5 E: [242157]
    automated match to d3maec_
    complexed with act, cl, co6
  6. Domain d2ii5f_: 2ii5 F: [242158]
    automated match to d3maec_
    complexed with act, cl, co6
  7. Domain d2ii5g_: 2ii5 G: [242159]
    automated match to d3maec_
    complexed with act, cl, co6
  8. Domain d2ii5h_: 2ii5 H: [242160]
    automated match to d3maec_
    complexed with act, cl, co6
Escherichia coli [TaxId:83334] [257130] (1 PDB entry)
- Domains for 4n72:
  1. Domain d4n72a_: 4n72 A: [257131]
    automated match to d1dpca_
  2. Domain d4n72b_: 4n72 B: [263106]
    automated match to d4n72a_
  3. Domain d4n72c_: 4n72 C: [263107]
    automated match to d4n72a_
Homo sapiens [TaxId:9606] [351317] (2 PDB entries)
1. Domain for 6ct0:
  - Domain d6ct00_: 6ct0 0: [351318]
    automated match to d1c4tc_
2. Domain for 6h05:
  - Domain d6h05a_: 6h05 A: [379187]
    automated match to d1b5sa_
Listeria monocytogenes [TaxId:265669] [225867] (1 PDB entry)
- Domains for 3mae:
  1. Domain d3maea_: 3mae A: [213168]
    automated match to d1c4tc_
    complexed with cl, gol, po4
  2. Domain d3maeb_: 3mae B: [213169]
    automated match to d1c4tc_
    complexed with cl, gol, po4
  3. Domain d3maec_: 3mae C: [213170]
    automated match to d1c4tc_
    complexed with cl, gol, po4
Mycobacterium tuberculosis [TaxId:1773] [189181] (1 PDB entry)
- Domain for 3l60:
  - Domain d3l60a_: 3l60 A: [179993]
    automated match to d1b5sa_
    complexed with unl
Norway rat (Rattus norvegicus) [TaxId:10116] [267774] (8 PDB entries)
1. Domains for 2deb:
  1. Domain d2deba1: 2deb A:441-658 [264251]
    automated match to d1nm8a2
    complexed with bog, coa, plm
  2. Domain d2debb1: 2deb B:441-657 [264252]
    automated match to d1nm8a2
    complexed with bog, coa, plm
2. Domain for 2fw3:
  - Domain d2fw3a1: 2fw3 A:441-654 [264286]
    automated match to d1nm8a2
    complexed with bui
3. Domain for 2fyo:
  - Domain d2fyoa1: 2fyo A:441-656 [264287]
    automated match to d1nm8a2
4. Domains for 2h4t:
  1. Domain d2h4ta1: 2h4t A:441-655 [264297]
    Other proteins in same PDB: d2h4ta2, d2h4tb2
    automated match to d1nm8a2
    complexed with d12
  2. Domain d2h4ta3: 2h4t A:32-440 [343677]
    Other proteins in same PDB: d2h4ta2, d2h4tb2
    complexed with d12
  3. Domain d2h4tb1: 2h4t B:441-656 [264298]
    Other proteins in same PDB: d2h4ta2, d2h4tb2
    automated match to d1nm8a2
    complexed with d12
  4. Domain d2h4tb3: 2h4t B:32-440 [343678]
    Other proteins in same PDB: d2h4ta2, d2h4tb2
    complexed with d12
5. Domains for 2rcu:
  1. Domain d2rcua1: 2rcu A:441-658 [264499]
    automated match to d1nm8a2
    complexed with bog, buj
  2. Domain d2rcub1: 2rcu B:441-658 [264500]
    automated match to d1nm8a2
    complexed with bog, buj
6. Domain for 4ep9:
  - Domain d4ep9a1: 4ep9 A:441-656 [266231]
    automated match to d1nm8a2
    complexed with 0rd, plm
7. Domain for 4eph:
  - Domain d4epha1: 4eph A:441-656 [266232]
    automated match to d1nm8a2
    complexed with 0rk, bog
8. Domain for 4eyw:
  - Domain d4eywa1: 4eyw A:441-658 [266240]
    automated match to d1nm8a2
    complexed with l0r, p6g

More info for Protein automated matches from c.43.1.0: automated matches

Timeline for Protein automated matches from c.43.1.0: automated matches:

Protein automated matches from c.43.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.43.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from c.43.1.0: automated matches appears in the current release, SCOPe 2.08