Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108002Fold c.33: Isochorismatase-like hydrolases [52498] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2108003Superfamily c.33.1: Isochorismatase-like hydrolases [52499] (2 families) (S)
  5. 2108056Family c.33.1.0: automated matches [191389] (1 protein)
    not a true family
  6. 2108057Protein automated matches [190499] (22 species)
    not a true protein

Species:

  1. 2108058Acinetobacter baumannii [TaxId:509173] [255667] (2 PDB entries)
    1. Domains for 2wt9:
      1. 2108060Domain d2wt9a_: 2wt9 A: [244278]
        automated match to d3hu5a_
        complexed with gol, nio, zn
      2. 2108061Domain d2wt9b_: 2wt9 B: [244279]
        automated match to d3hu5a_
        complexed with gol, nio, zn
    2. Domain for 2wta:
  2. 2108062Alkaliphilus metalliredigens [TaxId:293826] [225721] (1 PDB entry)
  3. 2108071Bordetella bronchiseptica [TaxId:518] [256004] (2 PDB entries)
    1. Domains for 3ot4:
      1. 2108080Domain d3ot4a_: 3ot4 A: [262313]
        automated match to d3uaod_
      2. 2108081Domain d3ot4b_: 3ot4 B: [262314]
        automated match to d3uaod_
      3. 2108082Domain d3ot4c_: 3ot4 C: [248326]
        automated match to d3hb7a_
      4. 2108083Domain d3ot4d_: 3ot4 D: [248327]
        automated match to d3hb7a_
      5. 2108084Domain d3ot4e_: 3ot4 E: [262315]
        automated match to d3uaod_
      6. 2108085Domain d3ot4f_: 3ot4 F: [248328]
        automated match to d3hb7a_
      7. 2108086Domain d3ot4g_: 3ot4 G: [248329]
        automated match to d3hb7a_
      8. 2108087Domain d3ot4h_: 3ot4 H: [248330]
        automated match to d3hb7a_
    2. Domains for 3uao:
      1. 2108072Domain d3uaoa_: 3uao A: [262345]
        automated match to d3uaod_
        complexed with act
      2. 2108073Domain d3uaob_: 3uao B: [262346]
        automated match to d3uaod_
        complexed with act
      3. 2108074Domain d3uaoc_: 3uao C: [262347]
        automated match to d3uaod_
        complexed with act
      4. 2108075Domain d3uaod_: 3uao D: [250183]
        automated match to d3hb7a_
        complexed with act
      5. 2108076Domain d3uaoe_: 3uao E: [262348]
        automated match to d3uaod_
        complexed with act
      6. 2108077Domain d3uaof_: 3uao F: [250184]
        automated match to d3hb7a_
        complexed with act
      7. 2108078Domain d3uaog_: 3uao G: [250185]
        automated match to d3hb7a_
        complexed with act
      8. 2108079Domain d3uaoh_: 3uao H: [250186]
        automated match to d3hb7a_
        complexed with act
  4. 2108088Burkholderia thailandensis [TaxId:271848] [189741] (1 PDB entry)
  5. 2108090Burkholderia xenovorans [TaxId:266265] [225992] (1 PDB entry)
  6. 2108093Chromobacterium violaceum [TaxId:243365] [193722] (1 PDB entry)
  7. 2108096Desulfovibrio vulgaris [TaxId:882] [225697] (1 PDB entry)
  8. 2108099Leishmania infantum [TaxId:5671] [256047] (1 PDB entry)
  9. 2108104Mycobacterium tuberculosis [TaxId:83332] [189601] (2 PDB entries)
    1. Domain for 3gbc:
    2. Domain for 3pl1:
  10. 2108107Nematode (Caenorhabditis elegans) [TaxId:6239] [187443] (1 PDB entry)
  11. 2108116Oleispira antarctica [TaxId:188908] [189277] (1 PDB entry)
  12. 2108118Pseudomonas putida [TaxId:1042876] [257820] (2 PDB entries)
    1. Domains for 4l07:
      1. 2108119Domain d4l07a_: 4l07 A: [257822]
        automated match to d3ot4c_
        complexed with gol, so4
      2. 2108120Domain d4l07b_: 4l07 B: [257821]
        automated match to d3ot4c_
        complexed with gol, so4
    2. Domains for 4l08:
      1. 2108121Domain d4l08a_: 4l08 A: [257823]
        automated match to d3ot4f_
        complexed with mae
      2. 2108122Domain d4l08b_: 4l08 B: [262887]
        automated match to d4l07a_
        complexed with mae
      3. 2108123Domain d4l08c_: 4l08 C: [262888]
        automated match to d4l07a_
        complexed with mae
      4. 2108124Domain d4l08d_: 4l08 D: [262889]
        automated match to d4l07a_
        complexed with mae
      5. 2108125Domain d4l08e_: 4l08 E: [262890]
        automated match to d4l07a_
        complexed with mae
      6. 2108126Domain d4l08f_: 4l08 F: [262891]
        automated match to d4l07a_
        complexed with mae
      7. 2108127Domain d4l08g_: 4l08 G: [262892]
        automated match to d4l07a_
        complexed with mae
      8. 2108128Domain d4l08h_: 4l08 H: [262893]
        automated match to d4l07a_
        complexed with mae
  13. 2108129Pseudomonas putida [TaxId:160488] [226529] (1 PDB entry)
  14. 2108132Pseudomonas syringae [TaxId:264730] [255894] (1 PDB entry)
  15. 2108134Streptococcus mutans [TaxId:1309] [256077] (1 PDB entry)
  16. 2108139Streptococcus pneumoniae [TaxId:170187] [255991] (5 PDB entries)
    1. Domains for 3o90:
      1. 2108156Domain d3o90a_: 3o90 A: [248129]
        automated match to d3hb7d_
        complexed with zn
      2. 2108157Domain d3o90b_: 3o90 B: [248130]
        automated match to d3hb7d_
        complexed with zn
      3. 2108158Domain d3o90c_: 3o90 C: [248131]
        automated match to d3hb7d_
        complexed with zn
      4. 2108159Domain d3o90d_: 3o90 D: [248132]
        automated match to d3hb7d_
        complexed with zn
    2. Domains for 3o91:
      1. 2108144Domain d3o91a_: 3o91 A: [248133]
        automated match to d3hb7b_
        complexed with zn
      2. 2108145Domain d3o91b_: 3o91 B: [248134]
        automated match to d3hb7b_
        complexed with zn
      3. 2108146Domain d3o91c_: 3o91 C: [248135]
        automated match to d3hb7b_
        complexed with zn
      4. 2108147Domain d3o91d_: 3o91 D: [248136]
        automated match to d3hb7b_
        complexed with zn
    3. Domains for 3o92:
      1. 2108152Domain d3o92a_: 3o92 A: [248137]
        automated match to d3hb7b_
        complexed with zn
      2. 2108153Domain d3o92b_: 3o92 B: [248138]
        automated match to d3hb7b_
        complexed with zn
      3. 2108154Domain d3o92c_: 3o92 C: [248139]
        automated match to d3hb7b_
        complexed with zn
      4. 2108155Domain d3o92d_: 3o92 D: [248140]
        automated match to d3hb7b_
        complexed with zn
    4. Domains for 3o93:
      1. 2108148Domain d3o93a_: 3o93 A: [248141]
        automated match to d3hb7b_
        complexed with zn
      2. 2108149Domain d3o93b_: 3o93 B: [248142]
        automated match to d3hb7b_
        complexed with zn
      3. 2108150Domain d3o93c_: 3o93 C: [248143]
        automated match to d3hb7b_
        complexed with zn
      4. 2108151Domain d3o93d_: 3o93 D: [248144]
        automated match to d3hb7b_
        complexed with zn
    5. Domains for 3o94:
      1. 2108140Domain d3o94a_: 3o94 A: [248145]
        automated match to d3hb7b_
        complexed with nca, zn
      2. 2108141Domain d3o94b_: 3o94 B: [248146]
        automated match to d3hb7b_
        complexed with nca, zn
      3. 2108142Domain d3o94c_: 3o94 C: [248147]
        automated match to d3hb7b_
        complexed with nca, zn
      4. 2108143Domain d3o94d_: 3o94 D: [248148]
        automated match to d3hb7b_
        complexed with nca, zn
  17. 2108160Streptomyces avermitilis [TaxId:33903] [189136] (1 PDB entry)
  18. 2108173Thermoplasma acidophilum [TaxId:2303] [225522] (1 PDB entry)
  19. 2108176Trypanosoma cruzi [TaxId:5693] [188160] (1 PDB entry)
  20. 2108178Vibrio cholerae [TaxId:666] [226451] (2 PDB entries)
    1. Domain for 3tb4:
    2. Domain for 3tg2:
  21. 2285394Microbacterium hydrocarbonoxydans [TaxId:273678] [328695] (3 PDB entries)
    1. Domain for 5ha8:
    2. Domain for 5hwg:
    3. Domain for 5hwh:
  22. 2297127Vibrio anguillarum [TaxId:882102] [340428] (1 PDB entry)

More info for Protein automated matches from c.33.1.0: automated matches

Timeline for Protein automated matches from c.33.1.0: automated matches: