Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870646Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
    duplication: tandem repeat of two RecA-like (AAA) domains
  6. 2870939Protein automated matches [190301] (7 species)
    not a true protein

Species:

  1. 2870940Anas platyrhynchos [TaxId:8839] [419890] (1 PDB entry)
  2. 2870943Archaeoglobus fulgidus [TaxId:224325] [387738] (1 PDB entry)
  3. 2870946Escherichia coli K-12 [TaxId:83333] [232480] (1 PDB entry)
  4. 2870949Flatworm (Dugesia japonica) [TaxId:6161] [188089] (1 PDB entry)
  5. 2870951Human (Homo sapiens) [TaxId:9606] [187108] (5 PDB entries)
    1. Domains for 2j0s:
      1. 2870952Domain d2j0sa1: 2j0s A:21-243 [137913]
        Other proteins in same PDB: d2j0sc_, d2j0sd_
        automated match to d2j0sa1
        protein/DNA complex; protein/RNA complex; complexed with anp, mg
      2. 2870953Domain d2j0sa2: 2j0s A:244-411 [137914]
        Other proteins in same PDB: d2j0sc_, d2j0sd_
        automated match to d2j0sa2
        protein/DNA complex; protein/RNA complex; complexed with anp, mg
    2. Domain for 3bor:
    3. Domains for 4c9b:
      1. 2870954Domain d4c9ba1: 4c9b A:21-243 [228917]
        automated match to d2j0sa1
        complexed with gol, po4
      2. 2870955Domain d4c9ba2: 4c9b A:244-411 [228918]
        automated match to d2j0sa2
        complexed with gol, po4
    4. Domains for 6icz:
      1. 2870957Domain d6iczu1: 6icz u:22-243 [365954]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq1, d6iczq2, d6iczr1, d6iczr2, d6iczs_, d6iczt_, d6iczv_, d6iczy_
        automated match to d2hyic1
        complexed with atp, gtp, ihp, mg, zn
      2. 2870958Domain d6iczu2: 6icz u:244-407 [365955]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq1, d6iczq2, d6iczr1, d6iczr2, d6iczs_, d6iczt_, d6iczv_, d6iczy_
        automated match to d2hyic2
        complexed with atp, gtp, ihp, mg, zn
    5. Domains for 6yvh:
      1. 2870959Domain d6yvhh_: 6yvh H: [385694]
        automated match to d1fuka_
        protein/RNA complex
      2. 2870960Domain d6yvhj_: 6yvh J: [385696]
        automated match to d1fuka_
        protein/RNA complex
      3. 2870961Domain d6yvhk_: 6yvh K: [385698]
        automated match to d1fuka_
        protein/RNA complex
      4. 2870962Domain d6yvhl_: 6yvh L: [385715]
        automated match to d1fuka_
        protein/RNA complex
  6. Sulfolobus solfataricus [TaxId:2287] [267762] (1 PDB entry)
  7. 2870966Sulfolobus solfataricus [TaxId:273057] [267761] (1 PDB entry)

More info for Protein automated matches from c.37.1.19: Tandem AAA-ATPase domain

Timeline for Protein automated matches from c.37.1.19: Tandem AAA-ATPase domain: