Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2361840Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2362223Family b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (3 proteins)
  6. 2362267Protein automated matches [190183] (10 species)
    not a true protein

Species:

  1. 2362268Dengue virus 1 [TaxId:11053] [195098] (4 PDB entries)
    1. Domain for 3irc:
    2. Domain for 3uzq:
    3. Domain for 4ffy:
    4. Domain for 4l5f:
  2. 2362273Dengue virus 2 [TaxId:11064] [195986] (1 PDB entry)
  3. 2362275Dengue virus 3 [TaxId:11069] [195240] (2 PDB entries)
    1. Domain for 3uze:
    2. Domain for 4ala:
  4. 2362278Dengue virus [TaxId:12637] [195242] (1 PDB entry)
  5. 2362280West Nile virus [TaxId:11082] [186921] (3 PDB entries)
    1. Domain for 1ztx:
    2. Domains for 2p5p:
      1. 2362282Domain d2p5pa_: 2p5p A: [149257]
        automated match to d1s6na_
      2. 2362283Domain d2p5pb_: 2p5p B: [149258]
        automated match to d1s6na_
      3. 2362284Domain d2p5pc_: 2p5p C: [149259]
        automated match to d1s6na_
    3. Domain for 6ute:
  6. 2362285Zika virus (strain mr 766) [TaxId:64320] [339905] (1 PDB entry)
  7. 2362287Zika virus [TaxId:64320] [320471] (7 PDB entries)
    1. Domain for 5kvd:
    2. Domain for 5kve:
    3. Domain for 5kvf:
    4. Domain for 5kvg:
    5. Domains for 5vig:
      1. 2362292Domain d5vigg_: 5vig G: [334014]
        Other proteins in same PDB: d5vigb1, d5vigb2, d5vigl1, d5vigl2
        automated match to d1s6na_
        complexed with flc
      2. 2362293Domain d5vigz_: 5vig Z: [334012]
        Other proteins in same PDB: d5vigb1, d5vigb2, d5vigl1, d5vigl2
        automated match to d1s6na_
        complexed with flc
    6. Domain for 6dfi:
    7. Domains for 6jep:
      1. 3068835Domain d6jepf_: 6jep F: [368897]
        Other proteins in same PDB: d6jepi1, d6jepi2, d6jepl1, d6jepl2
        automated match to d5omza_
      2. 3068936Domain d6jepe_: 6jep E: [368998]
        Other proteins in same PDB: d6jepi1, d6jepi2, d6jepl1, d6jepl2
        automated match to d5omza_
  8. 3059178Dengue virus 2 [TaxId:11060] [359240] (2 PDB entries)
    1. Domain for 6fla:
    2. Domains for 6flc:
      1. 3059179Domain d6flcg_: 6flc G: [359241]
        Other proteins in same PDB: d6flca1, d6flca2, d6flcl1, d6flcl2
        automated match to d3uzva_
        complexed with gol
      2. 3059182Domain d6flci_: 6flc I: [359244]
        Other proteins in same PDB: d6flca1, d6flca2, d6flcl1, d6flcl2
        automated match to d3uzva_
        complexed with gol
  9. 3077084Zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013 [TaxId:2043570] [377146] (2 PDB entries)
    1. Domains for 6plk:
      1. 3077085Domain d6plke_: 6plk E: [377147]
        Other proteins in same PDB: d6plkl1, d6plkl2, d6plkm1, d6plkm2
        automated match to d5omza_
      2. 3077086Domain d6plkf_: 6plk F: [377148]
        Other proteins in same PDB: d6plkl1, d6plkl2, d6plkm1, d6plkm2
        automated match to d5omza_
    2. Domains for 6uta:
      1. 3083854Domain d6utac_: 6uta C: [383916]
        Other proteins in same PDB: d6utab1, d6utab2, d6utal1, d6utal2
        automated match to d5omza_
      2. 3083875Domain d6utae_: 6uta E: [383937]
        Other proteins in same PDB: d6utab1, d6utab2, d6utal1, d6utal2
        automated match to d5omza_
  10. 3091400Usutu virus [TaxId:64286] [391462] (4 PDB entries)
    1. Domain for 6s92:
    2. Domains for 6s93:
      1. 3091407Domain d6s93c_: 6s93 C: [391469]
        automated match to d1pjwa_
      2. 3091408Domain d6s93b_: 6s93 B: [391470]
        automated match to d1pjwa_
      3. 3091421Domain d6s93a_: 6s93 A: [391483]
        automated match to d1pjwa_
    3. Domains for 6s94:
      1. 3091401Domain d6s94b_: 6s94 B: [391463]
        automated match to d1pjwa_
      2. 3091414Domain d6s94a_: 6s94 A: [391476]
        automated match to d1pjwa_
    4. Domains for 6s95:
      1. 3091416Domain d6s95a_: 6s95 A: [391478]
        automated match to d1pjwa_
      2. 3091431Domain d6s95b_: 6s95 B: [391493]
        automated match to d1pjwa_

More info for Protein automated matches from b.1.18.4: Class II viral fusion proteins C-terminal domain

Timeline for Protein automated matches from b.1.18.4: Class II viral fusion proteins C-terminal domain: