SCOPe 2.03: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)
Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
automatically mapped to Pfam PF03414
Protein automated matches [190178] (2 species)
not a true protein

Species:

Cow (Bos taurus) [TaxId:9913] [188618] (2 PDB entries)
1. Domain for 2vxl:
  - Domain d2vxla_: 2vxl A: [168917]
    automated match to d1fg5n_
    complexed with mn, udp; mutant
2. Domains for 2vxm:
  1. Domain d2vxma_: 2vxm A: [168918]
    automated match to d1fg5n_
    complexed with gol, mpd; mutant
  2. Domain d2vxmb_: 2vxm B: [168919]
    automated match to d1fg5n_
    complexed with gol, mpd; mutant
  3. Domain d2vxmc_: 2vxm C: [168920]
    automated match to d1fg5n_
    complexed with gol, mpd; mutant
  4. Domain d2vxmd_: 2vxm D: [168921]
    automated match to d1fg5n_
    complexed with gol, mpd; mutant
Human (Homo sapiens) [TaxId:9606] [186910] (36 PDB entries)
1. Domain for 1ziz:
  - Domain d1ziza_: 1ziz A: [125140]
    automated match to d1lz7a_
    complexed with cl, gal, hg
2. Domain for 1zj0:
  - Domain d1zj0a_: 1zj0 A: [125141]
    automated match to d1lz7a_
    complexed with cl, hg, lat
3. Domain for 1zj1:
  - Domain d1zj1a_: 1zj1 A: [125142]
    automated match to d1lz7a_
    complexed with cl, hg, nlc
4. Domain for 1zj2:
  - Domain d1zj2a_: 1zj2 A: [125143]
    automated match to d1lz7a_
    complexed with cl, dr3, hg, mn, udp
5. Domain for 1zj3:
  - Domain d1zj3a_: 1zj3 A: [125144]
    automated match to d1lz7a_
    complexed with cl, dr2, hg
6. Domain for 1zjp:
  - Domain d1zjpa_: 1zjp A: [125160]
    automated match to d1lz7a_
    complexed with cl, dr4, hg, mn, udp
7. Domain for 2a8u:
  - Domain d2a8ua_: 2a8u A: [126420]
    automated match to d1lz7a_
    complexed with cl, dr5, hg, mn, udp
8. Domain for 2rit:
  - Domain d2rita_: 2rit A: [152098]
    automated match to d1lz7a_
    complexed with gol
9. Domain for 2rix:
  - Domain d2rixa_: 2rix A: [152100]
    automated match to d1lz7a_
    complexed with gol, mn, udp
10. Domain for 2riy:
  - Domain d2riya_: 2riy A: [152101]
    automated match to d1lz7a_
    complexed with bhe
11. Domain for 2rj8:
  - Domain d2rj8a_: 2rj8 A: [152102]
    automated match to d1lz7a_
    complexed with bhe, mn, udp
12. Domain for 2rj9:
  - Domain d2rj9a_: 2rj9 A: [152103]
    automated match to d1lz7a_
    complexed with ad7, mn, udp
13. Domains for 2y7a:
  1. Domain d2y7aa_: 2y7a A: [231595]
    automated match to d2y7ab_
    complexed with mn, udp
  2. Domain d2y7ab_: 2y7a B: [196020]
    automated match to d2rj1a_
    complexed with mn, udp
  3. Domain d2y7ac_: 2y7a C: [196019]
    automated match to d2rj1a_
    complexed with mn, udp
  4. Domain d2y7ad_: 2y7a D: [231596]
    automated match to d2y7ab_
    complexed with mn, udp
14. Domain for 3i0c:
  - Domain d3i0ca_: 3i0c A: [177997]
    automated match to d1lz7a_
15. Domain for 3i0d:
  - Domain d3i0da_: 3i0d A: [177998]
    automated match to d1lz7a_
    complexed with udp
16. Domain for 3i0e:
  - Domain d3i0ea_: 3i0e A: [177999]
    automated match to d1lz7a_
17. Domain for 3i0f:
  - Domain d3i0fa_: 3i0f A: [178000]
    automated match to d1lz7a_
    complexed with mn, u, udp
18. Domain for 3i0g:
  - Domain d3i0ga_: 3i0g A: [178001]
    automated match to d1lz7a_
    complexed with gal, mn, udp
19. Domain for 3i0h:
  - Domain d3i0ha_: 3i0h A: [178002]
    automated match to d1lz7a_
20. Domain for 3i0i:
  - Domain d3i0ix_: 3i0i X: [178003]
    automated match to d1lz7a_
    complexed with udp
21. Domain for 3i0j:
  - Domain d3i0ja_: 3i0j A: [178004]
    automated match to d1lz7a_
22. Domain for 3i0k:
  - Domain d3i0ka1: 3i0k A:71-345 [178005]
    automated match to d1lz7a_
    complexed with udp
23. Domain for 3i0l:
  - Domain d3i0la_: 3i0l A: [178006]
    automated match to d1lz7a_
    complexed with gal, udp
24. Domain for 3sxd:
  - Domain d3sxda_: 3sxd A: [216608]
    automated match to d1ziza_
    complexed with gal, mn, peg, udp
25. Domain for 3v0l:
  - Domain d3v0la_: 3v0l A: [192609]
    automated match to d3sxga_
    complexed with 2gw, mn, so4; mutant
26. Domains for 3v0m:
  1. Domain d3v0ma_: 3v0m A: [192611]
    automated match to d3sxga_
    complexed with 5gw, bhe, mn, so4; mutant
  2. Domain d3v0mb_: 3v0m B: [192608]
    automated match to d3sxga_
    complexed with 5gw, bhe, mn, so4; mutant
27. Domains for 3v0n:
  1. Domain d3v0na_: 3v0n A: [192606]
    automated match to d3sxga_
    complexed with 3gw, 4gw, gol, mn, so4; mutant
  2. Domain d3v0nb_: 3v0n B: [192842]
    automated match to d3sxga_
    complexed with 3gw, 4gw, gol, mn, so4; mutant
28. Domains for 3v0o:
  1. Domain d3v0oa_: 3v0o A: [192607]
    automated match to d3sxga_
    complexed with 4gw, bhe, mn, so4; mutant
  2. Domain d3v0ob_: 3v0o B: [192843]
    automated match to d3sxga_
    complexed with 4gw, bhe, mn, so4; mutant
29. Domains for 3v0p:
  1. Domain d3v0pa_: 3v0p A: [192610]
    automated match to d3sxga_
    complexed with 4gw, bhe, mn, so4; mutant
  2. Domain d3v0pb_: 3v0p B: [192844]
    automated match to d3sxga_
    complexed with 4gw, bhe, mn, so4; mutant
30. Domains for 3v0q:
  1. Domain d3v0qa_: 3v0q A: [192612]
    automated match to d3sxga_
    complexed with bhe, gol, mn, so4, udp; mutant
  2. Domain d3v0qb_: 3v0q B: [192845]
    automated match to d3sxga_
    complexed with bhe, gol, mn, so4, udp; mutant
31. Domains for 3zgf:
  1. Domain d3zgfa_: 3zgf A: [192613]
    automated match to d3sxga_
    complexed with iug, mn, so4, udp; mutant
  2. Domain d3zgfb_: 3zgf B: [192846]
    automated match to d3sxga_
    complexed with iug, mn, so4, udp; mutant
32. Domains for 4c2s:
  1. Domain d4c2sa_: 4c2s A: [227839]
    automated match to d2rj7a_
    complexed with mn, udp; mutant
  2. Domain d4c2sb_: 4c2s B: [227840]
    automated match to d2rj7a_
    complexed with mn, udp; mutant
33. Domain for 4fqw:
  - Domain d4fqwa_: 4fqw A: [230017]
    automated match to d3v0qa_
    complexed with gal, pg4, udp
34. Domain for 4kc1:
  - Domain d4kc1a_: 4kc1 A: [227879]
    automated match to d3v0pa_
    complexed with bhe, mn, ws1
35. Domain for 4kc2:
  - Domain d4kc2a_: 4kc2 A: [235140]
    automated match to d4kc1a_
    complexed with bhe, mn, ws2
36. Domain for 4kc4:
  - Domain d4kc4a_: 4kc4 A: [235141]
    automated match to d4kc1a_
    complexed with bhe, mn, ws3

More info for Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like

Timeline for Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like:

Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like first appeared in SCOPe 2.01
Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like appears in SCOPe 2.02
Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like appears in SCOPe 2.04
Protein automated matches from c.68.1.9: alpha-1,3-galactosyltransferase-like appears in the current release, SCOPe 2.08