Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164133Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2164134Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2164520Family d.20.1.0: automated matches [191322] (1 protein)
    not a true family
  6. 2164521Protein automated matches [190120] (8 species)
    not a true protein

Species:

  1. 2164522Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226239] (1 PDB entry)
  2. 2164524Cow (Bos taurus) [TaxId:9913] [186972] (1 PDB entry)
  3. 2164526Human (Homo sapiens) [TaxId:9606] [186843] (18 PDB entries)
    1. Domain for 1wzv:
    2. Domain for 1wzw:
    3. Domain for 1zdn:
    4. Domain for 2ebk:
    5. Domain for 2ebm:
    6. Domain for 2edi:
    7. Domain for 2ob4:
    8. Domain for 3fn1:
    9. Domains for 3rz3:
      1. 2164533Domain d3rz3a1: 3rz3 A:7-183 [216129]
        Other proteins in same PDB: d3rz3a2, d3rz3b2
        automated match to d2cyxa_
        complexed with u94
      2. 2164534Domain d3rz3b1: 3rz3 B:7-183 [216130]
        Other proteins in same PDB: d3rz3a2, d3rz3b2
        automated match to d2cyxa_
        complexed with u94
      3. 2164535Domain d3rz3c_: 3rz3 C: [216131]
        Other proteins in same PDB: d3rz3a2, d3rz3b2
        automated match to d2cyxa_
        complexed with u94
      4. 2164536Domain d3rz3d_: 3rz3 D: [216132]
        Other proteins in same PDB: d3rz3a2, d3rz3b2
        automated match to d2cyxa_
        complexed with u94
    10. Domain for 4ip3:
    11. Domains for 4mdk:
      1. 2164540Domain d4mdka_: 4mdk A: [229757]
        Other proteins in same PDB: d4mdke1, d4mdke2, d4mdkf1, d4mdkf2, d4mdkg_, d4mdkh1, d4mdkh2
        automated match to d2ob4a_
        complexed with u94
      2. 2164541Domain d4mdkb_: 4mdk B: [229680]
        Other proteins in same PDB: d4mdke1, d4mdke2, d4mdkf1, d4mdkf2, d4mdkg_, d4mdkh1, d4mdkh2
        automated match to d2ob4a_
        complexed with u94
      3. 2164542Domain d4mdkc_: 4mdk C: [229685]
        Other proteins in same PDB: d4mdke1, d4mdke2, d4mdkf1, d4mdkf2, d4mdkg_, d4mdkh1, d4mdkh2
        automated match to d2ob4a_
        complexed with u94
      4. 2164543Domain d4mdkd_: 4mdk D: [229681]
        Other proteins in same PDB: d4mdke1, d4mdke2, d4mdkf1, d4mdkf2, d4mdkg_, d4mdkh1, d4mdkh2
        automated match to d2ob4a_
        complexed with u94
    12. Domain for 4q5e:
    13. Domain for 4q5h:
    14. Domain for 4w5v:
    15. Domain for 4y1l:
    16. Domain for 4yii:
    17. Domains for 5hpt:
      1. 2271493Domain d5hptf_: 5hpt F: [314794]
        Other proteins in same PDB: d5hptb_, d5hpte_, d5hpth_
        automated match to d2e2ca_
      2. 2271616Domain d5hptc_: 5hpt C: [314917]
        Other proteins in same PDB: d5hptb_, d5hpte_, d5hpth_
        automated match to d2e2ca_
    18. Domain for 5ngz:
  4. 2164549Plasmodium falciparum [TaxId:36329] [187332] (2 PDB entries)
    1. Domain for 2q0v:
    2. Domain for 3e95:
  5. 2164552Plasmodium yoelii [TaxId:5861] [255550] (1 PDB entry)
  6. 2164554Trypanosoma cruzi [TaxId:5693] [234333] (1 PDB entry)
  7. 2268325Arabidopsis thaliana [TaxId:3702] [311631] (1 PDB entry)
  8. 2286486Schizosaccharomyces pombe [TaxId:284812] [329787] (1 PDB entry)

More info for Protein automated matches from d.20.1.0: automated matches

Timeline for Protein automated matches from d.20.1.0: automated matches: