SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2042198Family b.29.1.1: Legume lectins [49900] (5 protein domains)
  6. 2042739Protein automated matches [190035] (24 species)
    not a true protein

Species:

  1. 2042740Bloodwood tree (Pterocarpus angolensis) [TaxId:182271] [186754] (21 PDB entries)
    1. Domains for 1s1a:
      1. 2042753Domain d1s1aa_: 1s1a A: [118840]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042754Domain d1s1ab_: 1s1a B: [118841]
        automated match to d1n3oa_
        complexed with ca, mn
    2. Domains for 2ar6:
      1. 2042745Domain d2ar6a_: 2ar6 A: [127191]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042746Domain d2ar6b_: 2ar6 B: [127192]
        automated match to d1n3oa_
        complexed with ca, mn
    3. Domains for 2arb:
      1. 2042751Domain d2arba_: 2arb A: [127193]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042752Domain d2arbb_: 2arb B: [127194]
        automated match to d1n3oa_
        complexed with ca, mn
    4. Domains for 2are:
      1. 2042741Domain d2area_: 2are A: [127195]
        automated match to d1n3oa_
        complexed with ca, man, mn
      2. 2042742Domain d2areb_: 2are B: [127196]
        automated match to d1n3oa_
        complexed with ca, man, mn
    5. Domains for 2arx:
      1. 2042759Domain d2arxa_: 2arx A: [127221]
        automated match to d1n3oa_
        complexed with ca, mn, nag
      2. 2042760Domain d2arxb_: 2arx B: [127222]
        automated match to d1n3oa_
        complexed with ca, mn, nag
    6. Domains for 2auy:
      1. 2042757Domain d2auya_: 2auy A: [127344]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042758Domain d2auyb_: 2auy B: [127345]
        automated match to d1n3oa_
        complexed with ca, mn
    7. Domains for 2gme:
      1. 2042749Domain d2gmea_: 2gme A: [135373]
        automated match to d1n3oa_
        complexed with so4
      2. 2042750Domain d2gmeb_: 2gme B: [135374]
        automated match to d1n3oa_
        complexed with so4
    8. Domains for 2gmm:
      1. 2042773Domain d2gmma_: 2gmm A: [135389]
        automated match to d1n3oa_
        complexed with so4
      2. 2042774Domain d2gmmb_: 2gmm B: [135390]
        automated match to d1n3oa_
        complexed with so4
    9. Domains for 2gmp:
      1. 2042779Domain d2gmpa_: 2gmp A: [135391]
        automated match to d1n3oa_
        complexed with man, nag, so4
      2. 2042780Domain d2gmpb_: 2gmp B: [135392]
        automated match to d1n3oa_
        complexed with man, nag, so4
    10. Domains for 2gn3:
      1. 2042765Domain d2gn3a_: 2gn3 A: [135404]
        automated match to d1n3oa_
        complexed with man, mma, so4
      2. 2042766Domain d2gn3b_: 2gn3 B: [135405]
        automated match to d1n3oa_
        complexed with man, mma, so4
    11. Domains for 2gn7:
      1. 2042781Domain d2gn7a_: 2gn7 A: [135406]
        automated match to d1n3oa_
        complexed with man
      2. 2042782Domain d2gn7b_: 2gn7 B: [135407]
        automated match to d1n3oa_
        complexed with man
    12. Domains for 2gnb:
      1. 2042777Domain d2gnba_: 2gnb A: [135408]
        automated match to d1n3oa_
        complexed with man
      2. 2042778Domain d2gnbb_: 2gnb B: [135409]
        automated match to d1n3oa_
        complexed with man
    13. Domains for 2gnd:
      1. 2042775Domain d2gnda_: 2gnd A: [135410]
        automated match to d1n3oa_
        complexed with ca, man, mn
      2. 2042776Domain d2gndb_: 2gnd B: [135411]
        automated match to d1n3oa_
        complexed with ca, man, mn
    14. Domains for 2gnm:
      1. 2042761Domain d2gnma_: 2gnm A: [135412]
        automated match to d1n3oa_
        complexed with ca, man, mn
      2. 2042762Domain d2gnmb_: 2gnm B: [135413]
        automated match to d1n3oa_
        complexed with ca, man, mn
    15. Domains for 2gnt:
      1. 2042763Domain d2gnta_: 2gnt A: [135417]
        automated match to d1n3oa_
        complexed with ca
      2. 2042764Domain d2gntb_: 2gnt B: [135418]
        automated match to d1n3oa_
        complexed with ca
    16. Domains for 2phf:
      1. 2042767Domain d2phfa_: 2phf A: [149472]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042768Domain d2phfb_: 2phf B: [149473]
        automated match to d1n3oa_
        complexed with ca, mn
    17. Domains for 2phr:
      1. 2042755Domain d2phra_: 2phr A: [149478]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042756Domain d2phrb_: 2phr B: [149479]
        automated match to d1n3oa_
        complexed with ca, mn
    18. Domains for 2pht:
      1. 2042769Domain d2phta_: 2pht A: [149480]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042770Domain d2phtb_: 2pht B: [149481]
        automated match to d1n3oa_
        complexed with ca, mn
    19. Domains for 2phu:
      1. 2042771Domain d2phua_: 2phu A: [149482]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042772Domain d2phub_: 2phu B: [149483]
        automated match to d1n3oa_
        complexed with ca, mn
    20. Domains for 2phw:
      1. 2042743Domain d2phwa_: 2phw A: [149484]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042744Domain d2phwb_: 2phw B: [149485]
        automated match to d1n3oa_
        complexed with ca, mn
    21. Domains for 2phx:
      1. 2042747Domain d2phxa_: 2phx A: [149486]
        automated match to d1n3oa_
        complexed with ca, mn
      2. 2042748Domain d2phxb_: 2phx B: [149487]
        automated match to d1n3oa_
        complexed with ca, mn
  2. 2042783Butea monosperma [TaxId:56060] [189858] (2 PDB entries)
    1. Domains for 3usu:
      1. 2042784Domain d3usua_: 3usu A: [186395]
        automated match to d1g9fa_
        complexed with abu, ca, gol, mn, nag, xyp
      2. 2042785Domain d3usuc_: 3usu C: [186396]
        automated match to d1g9fa_
        complexed with abu, ca, gol, mn, nag, xyp
      3. 2042786Domain d3usue_: 3usu E: [186397]
        automated match to d1g9fa_
        complexed with abu, ca, gol, mn, nag, xyp
      4. 2042787Domain d3usug_: 3usu G: [186398]
        automated match to d1g9fa_
        complexed with abu, ca, gol, mn, nag, xyp
    2. Domains for 4m3c:
      1. 2042788Domain d4m3ca_: 4m3c A: [227981]
        automated match to d3usua_
        complexed with abu, ca, gol, mn
      2. 2042789Domain d4m3cc_: 4m3c C: [235524]
        automated match to d4m3ca_
        complexed with abu, ca, gol, mn
  3. 2042790Camptosema pedicellatum [TaxId:232302] [194699] (1 PDB entry)
  4. 2042792Canavalia boliviana [TaxId:232300] [238384] (3 PDB entries)
    1. Domains for 4k1y:
      1. 2042798Domain d4k1ya_: 4k1y A: [253136]
        automated match to d4k1za_
        complexed with ca, cd, mdm, mn
      2. 2042799Domain d4k1yb_: 4k1y B: [253137]
        automated match to d4k1za_
        complexed with ca, cd, mdm, mn
      3. 2042800Domain d4k1yc_: 4k1y C: [253138]
        automated match to d4k1za_
        complexed with ca, cd, mdm, mn
      4. 2042801Domain d4k1yd_: 4k1y D: [253139]
        automated match to d4k1za_
        complexed with ca, cd, mdm, mn
    2. Domains for 4k1z:
      1. 2042794Domain d4k1za_: 4k1z A: [238385]
        automated match to d4i30a_
        complexed with ca, cd, cl, mn
      2. 2042795Domain d4k1zb_: 4k1z B: [240372]
        automated match to d4k1za_
        complexed with ca, cd, cl, mn
      3. 2042796Domain d4k1zc_: 4k1z C: [238386]
        automated match to d4i30a_
        complexed with ca, cd, cl, mn
      4. 2042797Domain d4k1zd_: 4k1z D: [238388]
        automated match to d4i30a_
        complexed with ca, cd, cl, mn
    3. Domain for 4k21:
  5. 2042802Canavalia gladiata [TaxId:3824] [187610] (5 PDB entries)
    1. Domains for 1wuv:
      1. 2042816Domain d1wuva_: 1wuv A: [161993]
        automated match to d1azda_
        complexed with ca, mn
      2. 2042817Domain d1wuvd_: 1wuv D: [161994]
        automated match to d1azda_
        complexed with ca, mn
      3. 2042818Domain d1wuvg_: 1wuv G: [161995]
        automated match to d1azda_
        complexed with ca, mn
      4. 2042819Domain d1wuvj_: 1wuv J: [161996]
        automated match to d1azda_
        complexed with ca, mn
    2. Domains for 2d7f:
      1. 2042812Domain d2d7fa_: 2d7f A: [163601]
        automated match to d1azda_
        complexed with ca, dbb, mma, mn
      2. 2042813Domain d2d7ff_: 2d7f F: [163602]
        automated match to d1azda_
        complexed with ca, dbb, mma, mn
      3. 2042814Domain d2d7fl_: 2d7f L: [163603]
        automated match to d1azda_
        complexed with ca, dbb, mma, mn
      4. 2042815Domain d2d7fs_: 2d7f S: [163604]
        automated match to d1azda_
        complexed with ca, dbb, mma, mn
    3. Domains for 2ef6:
      1. 2042808Domain d2ef6a_: 2ef6 A: [163973]
        automated match to d1azda_
        complexed with ca, mdm, mn
      2. 2042809Domain d2ef6b_: 2ef6 B: [163974]
        automated match to d1azda_
        complexed with ca, mdm, mn
      3. 2042810Domain d2ef6c_: 2ef6 C: [163975]
        automated match to d1azda_
        complexed with ca, mdm, mn
      4. 2042811Domain d2ef6d_: 2ef6 D: [163976]
        automated match to d1azda_
        complexed with ca, mdm, mn
    4. Domain for 2ovu:
    5. Domains for 2p2k:
      1. 2042804Domain d2p2ka_: 2p2k A: [166959]
        automated match to d1azda_
        complexed with ca, mn
      2. 2042805Domain d2p2kb_: 2p2k B: [166960]
        automated match to d1azda_
        complexed with ca, mn
      3. 2042806Domain d2p2kc_: 2p2k C: [166961]
        automated match to d1azda_
        complexed with ca, mn
      4. 2042807Domain d2p2kd_: 2p2k D: [166962]
        automated match to d1azda_
        complexed with ca, mn
  6. 2042820Canavalia grandiflora [TaxId:232301] [256991] (1 PDB entry)
  7. 2042822Canavalia lineata [TaxId:28957] [193321] (5 PDB entries)
    1. Domain for 3s0s:
    2. Domain for 3snm:
    3. Domains for 4dpn:
      1. 2042825Domain d4dpna_: 4dpn A: [219921]
        automated match to d2cwma_
        complexed with ca, mn, stl
      2. 2042826Domain d4dpnd_: 4dpn D: [219922]
        automated match to d2cwma_
        complexed with ca, mn, stl
    4. Domain for 4i30:
    5. Domains for 5byn:
      1. 2042828Domain d5byna_: 5byn A: [279420]
        automated match to d4i30a_
        complexed with 4wm, ca, cd, edo, mn, peg
      2. 2042829Domain d5bynb_: 5byn B: [279421]
        automated match to d4i30a_
        complexed with 4wm, ca, cd, edo, mn, peg
  8. 2042830Canavalia maritima [TaxId:3825] [187574] (6 PDB entries)
    1. Domains for 2cwm:
      1. 2042834Domain d2cwma_: 2cwm A: [163481]
        automated match to d1apna_
        complexed with ca, mn
      2. 2042835Domain d2cwmd_: 2cwm D: [163482]
        automated match to d1apna_
        complexed with ca, mn
    2. Domains for 2cy6:
      1. 2042836Domain d2cy6a_: 2cy6 A: [163508]
        automated match to d1apna_
        complexed with ca, mn, tre
      2. 2042837Domain d2cy6d_: 2cy6 D: [163509]
        automated match to d1apna_
        complexed with ca, mn, tre
    3. Domains for 2cyf:
      1. 2042832Domain d2cyfa_: 2cyf A: [163512]
        automated match to d1apna_
        complexed with ca, mal, mn
      2. 2042833Domain d2cyfc_: 2cyf C: [163513]
        automated match to d1apna_
        complexed with ca, mal, mn
    4. Domain for 2ow4:
    5. Domains for 2p34:
      1. 2042838Domain d2p34a_: 2p34 A: [166982]
        automated match to d1apna_
        complexed with ca, mn
      2. 2042839Domain d2p34b_: 2p34 B: [166983]
        automated match to d1apna_
        complexed with ca, mn
      3. 2042840Domain d2p34c_: 2p34 C: [166984]
        automated match to d1apna_
        complexed with ca, mn
      4. 2042841Domain d2p34d_: 2p34 D: [166985]
        automated match to d1apna_
        complexed with ca, mn
    6. Domains for 2p37:
      1. 2042842Domain d2p37a_: 2p37 A: [166986]
        automated match to d1apna_
        complexed with ca, m13, mn
      2. 2042843Domain d2p37b_: 2p37 B: [166987]
        automated match to d1apna_
        complexed with ca, m13, mn
      3. 2042844Domain d2p37c_: 2p37 C: [166988]
        automated match to d1apna_
        complexed with ca, m13, mn
      4. 2042845Domain d2p37d_: 2p37 D: [166989]
        automated match to d1apna_
        complexed with ca, m13, mn
  9. 2042846Coral tree (Erythrina corallodendron) [TaxId:3843] [189686] (3 PDB entries)
    1. Domain for 3n35:
    2. Domain for 3n36:
    3. Domain for 3n3h:
  10. 2042850Cratylia argentea [TaxId:83131] [187602] (2 PDB entries)
    1. Domains for 2d3p:
      1. 2042851Domain d2d3pa_: 2d3p A: [163567]
        automated match to d1mvqa_
        complexed with ca, mn
      2. 2042852Domain d2d3pb_: 2d3p B: [163568]
        automated match to d1mvqa_
        complexed with ca, mn
      3. 2042853Domain d2d3pc_: 2d3p C: [163569]
        automated match to d1mvqa_
        complexed with ca, mn
      4. 2042854Domain d2d3pd_: 2d3p D: [163570]
        automated match to d1mvqa_
        complexed with ca, mn
    2. Domains for 2d3r:
      1. 2042855Domain d2d3ra_: 2d3r A: [163571]
        automated match to d1mvqa_
        complexed with ca, mn
      2. 2042856Domain d2d3rb_: 2d3r B: [163572]
        automated match to d1mvqa_
        complexed with ca, mn
      3. 2042857Domain d2d3rc_: 2d3r C: [163573]
        automated match to d1mvqa_
        complexed with ca, mn
      4. 2042858Domain d2d3rd_: 2d3r D: [163574]
        automated match to d1mvqa_
        complexed with ca, mn
  11. 2042859Cymbosema roseum [TaxId:202239] [189292] (2 PDB entries)
    1. Domains for 3a0k:
      1. 2042860Domain d3a0ka_: 3a0k A: [171634]
        automated match to d1h9wa_
        complexed with aba, ca, mn
      2. 2042861Domain d3a0kc_: 3a0k C: [171635]
        automated match to d1h9wa_
        complexed with aba, ca, mn
      3. 2042862Domain d3a0ke_: 3a0k E: [171636]
        automated match to d1h9wa_
        complexed with aba, ca, mn
      4. 2042863Domain d3a0kg_: 3a0k G: [171637]
        automated match to d1h9wa_
        complexed with aba, ca, mn
    2. Domain for 4mye:
  12. 2042865Dioclea rostrata [TaxId:192416] [188569] (1 PDB entry)
  13. 2042867Dioclea sclerocarpa [TaxId:1176036] [268405] (1 PDB entry)
  14. 2042869Dioclea violacea [TaxId:192415] [187744] (2 PDB entries)
    1. Domains for 2gdf:
      1. 2042870Domain d2gdfa_: 2gdf A: [164665]
        automated match to d1dgla_
        complexed with ca, mn
      2. 2042871Domain d2gdfb_: 2gdf B: [164666]
        automated match to d1dgla_
        complexed with ca, mn
      3. 2042872Domain d2gdfc_: 2gdf C: [164667]
        automated match to d1dgla_
        complexed with ca, mn
      4. 2042873Domain d2gdfd_: 2gdf D: [164668]
        automated match to d1dgla_
        complexed with ca, mn
    2. Domain for 3ax4:
  15. 2042875Dioclea virgata [TaxId:167618] [189798] (2 PDB entries)
    1. Domain for 3rrd:
    2. Domain for 3rs6:
  16. 2042878Dioclea wilsonii [TaxId:763456] [189735] (1 PDB entry)
  17. 2042880Duke (Dioclea guianensis) [TaxId:99571] [188246] (2 PDB entries)
    1. Domain for 2jdz:
    2. Domain for 2je7:
  18. 2042883French bean (Phaseolus vulgaris) [TaxId:3885] [238518] (3 PDB entries)
    1. Domains for 3wcr:
      1. 2042888Domain d3wcra_: 3wcr A: [239907]
        automated match to d3wcsa_
        complexed with br, nag
      2. 2042889Domain d3wcrb_: 3wcr B: [238520]
        automated match to d1g8wa_
        complexed with br, nag
    2. Domains for 3wcs:
      1. 2042884Domain d3wcsa_: 3wcs A: [238519]
        automated match to d1g8wa_
        complexed with ca, edo, mn, nag
      2. 2042885Domain d3wcsb_: 3wcs B: [239908]
        automated match to d3wcrb_
        complexed with ca, edo, mn, nag
    3. Domains for 3wog:
      1. 2042886Domain d3woga_: 3wog A: [250751]
        automated match to d3wcsa_
        complexed with ca, mn, nag
      2. 2042887Domain d3wogb_: 3wog B: [250752]
        automated match to d3wcrb_
        complexed with ca, mn, nag
  19. 2042890Mucana (Dioclea grandiflora) [TaxId:3837] [188247] (3 PDB entries)
    1. Domains for 2je9:
      1. 2042895Domain d2je9a1: 2je9 A:3-239 [198109]
        Other proteins in same PDB: d2je9a2, d2je9b2, d2je9c2, d2je9d2
        automated match to d2je9d_
        complexed with ca, mn, so4, xmm
      2. 2042896Domain d2je9b1: 2je9 B:3-239 [198110]
        Other proteins in same PDB: d2je9a2, d2je9b2, d2je9c2, d2je9d2
        automated match to d2je9d_
        complexed with ca, mn, so4, xmm
      3. 2042897Domain d2je9c1: 2je9 C:3-239 [198111]
        Other proteins in same PDB: d2je9a2, d2je9b2, d2je9c2, d2je9d2
        automated match to d2je9d_
        complexed with ca, mn, so4, xmm
      4. 2042898Domain d2je9d1: 2je9 D:3-239 [166145]
        Other proteins in same PDB: d2je9a2, d2je9b2, d2je9c2, d2je9d2
        automated match to d1dgla_
        complexed with ca, mn, so4, xmm
    2. Domains for 2jec:
      1. 2042891Domain d2jeca1: 2jec A:3-239 [198112]
        Other proteins in same PDB: d2jeca2, d2jecb2, d2jecc2, d2jecd2
        automated match to d2jecd_
        complexed with ca, mn, xmm; mutant
      2. 2042892Domain d2jecb1: 2jec B:3-239 [198113]
        Other proteins in same PDB: d2jeca2, d2jecb2, d2jecc2, d2jecd2
        automated match to d2jecd_
        complexed with ca, mn, xmm; mutant
      3. 2042893Domain d2jecc1: 2jec C:3-239 [198114]
        Other proteins in same PDB: d2jeca2, d2jecb2, d2jecc2, d2jecd2
        automated match to d2jecd_
        complexed with ca, mn, xmm; mutant
      4. 2042894Domain d2jecd1: 2jec D:3-239 [166146]
        Other proteins in same PDB: d2jeca2, d2jecb2, d2jecc2, d2jecd2
        automated match to d1dgla_
        complexed with ca, mn, xmm; mutant
    3. Domain for 4z8b:
  20. 2042900Platypodium elegans [TaxId:115002] [189870] (2 PDB entries)
    1. Domains for 3zvx:
      1. 2042903Domain d3zvxa_: 3zvx A: [186605]
        automated match to d1n3oa_
        complexed with ca, gol, mn, so4
      2. 2042904Domain d3zvxb_: 3zvx B: [186606]
        automated match to d1n3oa_
        complexed with ca, gol, mn, so4
    2. Domains for 3zyr:
      1. 2042901Domain d3zyra_: 3zyr A: [186661]
        automated match to d1n3oa_
        complexed with asn, ca, gol, mn, ure
      2. 2042902Domain d3zyrb_: 3zyr B: [186662]
        automated match to d1n3oa_
        complexed with asn, ca, gol, mn, ure
  21. 2042905Winged bean (Psophocarpus tetragonolobus) [TaxId:3891] [187047] (1 PDB entry)
  22. 2270505Centrolobium tomentosum [TaxId:500182] [313810] (2 PDB entries)
    1. Domains for 5eyx:
      1. 2270873Domain d5eyxa_: 5eyx A: [314178]
        automated match to d3zvxb_
        complexed with ca, mdm, mn, nag
      2. 2271034Domain d5eyxb_: 5eyx B: [314339]
        automated match to d3zvxb_
        complexed with ca, mdm, mn, nag
    2. Domain for 5eyy:
  23. 2281139Canavalia cathartica [TaxId:28958] [324440] (1 PDB entry)
  24. 2286568Dioclea reflexa [TaxId:1048258] [329869] (1 PDB entry)

More info for Protein automated matches from b.29.1.1: Legume lectins

Timeline for Protein automated matches from b.29.1.1: Legume lectins: