Lineage for Species: Pseudomonas mendocina [TaxId: 300]

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1637451Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1639834Superfamily d.15.12: TmoB-like [110814] (2 families) (S)
    possibly related to the ubiquitin-like and/or 2Fe-2S ferredoxin-like superfamilies
  5. 1639856Family d.15.12.0: automated matches [191572] (1 protein)
    not a true family
  6. 1639857Protein automated matches [190991] (1 species)
    not a true protein
  7. 1639858Species Pseudomonas mendocina [TaxId:300] [188696] (15 PDB entries)

PDB entries in Species: Pseudomonas mendocina [TaxId: 300]:

  1. Domain(s) for 3dhg:
    1. 1639865Domain d3dhgc_: 3dhg C: [173941]
      Other proteins in same PDB: d3dhga_, d3dhgd_
      automated match to d1t0rc_
      complexed with azi, ca, fe
    2. 1639866Domain d3dhgf_: 3dhg F: [173943]
      Other proteins in same PDB: d3dhga_, d3dhgd_
      automated match to d1t0rc_
      complexed with azi, ca, fe
  2. Domain(s) for 3dhh:
  3. Domain(s) for 3dhi:
  4. Domain(s) for 3ge3:
  5. Domain(s) for 3ge8:
    1. 1639875Domain d3ge8c_: 3ge8 C: [176571]
      Other proteins in same PDB: d3ge8a_, d3ge8d_, d3ge8e_, d3ge8h_
      automated match to d1t0rc_
      complexed with act, fe
    2. 1639876Domain d3ge8g_: 3ge8 G: [176574]
      Other proteins in same PDB: d3ge8a_, d3ge8d_, d3ge8e_, d3ge8h_
      automated match to d1t0rc_
      complexed with act, fe
  6. Domain(s) for 3i5j:
  7. Domain(s) for 3i63:
  8. Domain(s) for 3q14:
  9. Domain(s) for 3q2a:
  10. Domain(s) for 3q3m:
    1. 1639860Domain d3q3mc_: 3q3m C: [184187]
      Other proteins in same PDB: d3q3ma_, d3q3md_, d3q3me_, d3q3mh_
      automated match to d1t0rc_
      complexed with fe, z82
    2. 1639861Domain d3q3mg_: 3q3m G: [184190]
      Other proteins in same PDB: d3q3ma_, d3q3md_, d3q3me_, d3q3mh_
      automated match to d1t0rc_
      complexed with fe, z82
  11. Domain(s) for 3q3n:
  12. Domain(s) for 3q3o:
  13. Domain(s) for 3ri7:
  14. Domain(s) for 3rmk:
    1. 1639867Domain d3rmkc_: 3rmk C: [196048]
      Other proteins in same PDB: d3rmka_, d3rmkd_
      automated match to d3ge3c_
      complexed with bml, ca, fe, pge
    2. 1639868Domain d3rmkf_: 3rmk F: [200500]
      Other proteins in same PDB: d3rmka_, d3rmkd_
      automated match to d3rmkc_
      complexed with bml, ca, fe, pge
  15. Domain(s) for 4p1c:
    1. 1639877Domain d4p1cc_: 4p1c C: [259899]
      Other proteins in same PDB: d4p1cd_, d4p1ci_
      automated match to d3ge3c_
      complexed with fe, fes, peg
    2. 1639878Domain d4p1cf_: 4p1c F: [260214]
      Other proteins in same PDB: d4p1ca_, d4p1ch_
      automated match to d3ge3c_
      complexed with fe, fes, peg

More info for Species Pseudomonas mendocina [TaxId:300] from d.15.12.0 automated matches

Timeline for Species Pseudomonas mendocina [TaxId:300] from d.15.12.0 automated matches: