Lineage for Protein: Bacteriophytochrome BphP

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1665312Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 1665377Superfamily d.110.2: GAF domain-like [55781] (5 families) (S)
    alpha(2)-beta(3)-alpha-beta(3)-alpha; antiparallel beta-sheet: order 321654
  5. 1665378Family d.110.2.1: GAF domain [55782] (8 proteins)
  6. 1665383Protein Bacteriophytochrome BphP [160661] (3 species)

Species:

  1. 1665384Deinococcus radiodurans [TaxId:1299] [160663] (3 PDB entries)
    Uniprot Q9RZA4 135-321! Uniprot Q9RZA4 137-325
    1. Domain for 1ztu:
    2. Domain for 2o9b:
    3. Domain for 2o9c:
  2. 1665388Deinococcus radiodurans [TaxId:243230] [258261] (1 PDB entry)
  3. 1665390Pseudomonas aeruginosa [TaxId:287] [160662] (5 PDB entries)
    Uniprot Q9HWR3 118-309
    1. Domains for 3c2w:
      1. 1665400Domain d3c2wa1: 3c2w A:118-309 [155887]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        complexed with bla
      2. 1665401Domain d3c2wb1: 3c2w B:118-309 [155890]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      3. 1665402Domain d3c2wc1: 3c2w C:118-309 [155893]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      4. 1665403Domain d3c2wd1: 3c2w D:118-309 [155896]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      5. 1665404Domain d3c2we1: 3c2w E:118-309 [155899]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      6. 1665405Domain d3c2wf1: 3c2w F:118-309 [155902]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      7. 1665406Domain d3c2wg1: 3c2w G:118-309 [155905]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
      8. 1665407Domain d3c2wh1: 3c2w H:118-309 [155908]
        Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
        automated match to d3c2wa1
        complexed with bla
    2. Domains for 3nhq:
      1. 1665391Domain d3nhqa2: 3nhq A:118-309 [213956]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      2. 1665392Domain d3nhqb2: 3nhq B:118-309 [213959]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      3. 1665393Domain d3nhqc2: 3nhq C:118-309 [213962]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      4. 1665394Domain d3nhqd2: 3nhq D:118-309 [213965]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      5. 1665395Domain d3nhqe2: 3nhq E:118-309 [213968]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      6. 1665396Domain d3nhqf2: 3nhq F:118-309 [213971]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      7. 1665397Domain d3nhqg2: 3nhq G:118-309 [213974]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
      8. 1665398Domain d3nhqh2: 3nhq H:118-309 [213977]
        Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
        automated match to d3c2wa1
        complexed with bla
    3. Domain for 3nop:
    4. Domain for 3not:
    5. Domain for 3nou:

More info for Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain

Timeline for Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain: