SCOPe 2.04: Domain d2riya_: 2riy A:

Lineage for d2riya_ (2riy A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
   automatically mapped to Pfam PF03414

6. Protein automated matches [190178] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186910] (36 PDB entries)

8. Domain d2riya_: 2riy A: [152101]
   automated match to d1lz7a_
   complexed with bhe

Details for d2riya_

PDB Entry: 2riy, 1.55 Å

PDB Description: b-specific-1,3-galactosyltransferase (gtb)+h-antigen acceptor

PDB Compounds: (A:) Glycoprotein-fucosylgalactoside alpha-galactosyltransferase

SCOPe Domain Sequences for d2riya_:

Sequence, based on SEQRES records:

>d2riya_ c.68.1.9 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvf
aikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgaykrw
qdvsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssr
eaftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwh
deshlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavp

Sequence, based on observed residues (ATOM records):

>d2riya_ c.68.1.9 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvf
aikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevsmrrme
misdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftyerrp
qsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdeshlnkyl
lrhkptkvlspeylwdqqllgwpavlrklrftavp

Timeline for d2riya_:

• d2riya_ first appeared in SCOP 1.75, called d2riya1
  
• d2riya_ appears in SCOPe 2.03
  
• d2riya_ appears in SCOPe 2.05
  
• d2riya_ appears in the current release, SCOPe 2.08, called d2riya2